Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   RN80_RS00750 Genome accession   NZ_CP012646
Coordinates   135460..136470 (-) Length   336 a.a.
NCBI ID   WP_001090628.1    Uniprot ID   F9HAD8
Organism   Streptococcus mitis strain KCOM 1350 (= ChDC B183)     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 130460..141470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RN80_RS00720 (RN80_00725) - 131751..132053 (-) 303 WP_060627182.1 hypothetical protein -
  RN80_RS00725 (RN80_00730) - 132215..132667 (+) 453 WP_000079148.1 universal stress protein -
  RN80_RS00735 (RN80_00740) - 132804..134195 (-) 1392 WP_060627183.1 Cof-type HAD-IIB family hydrolase -
  RN80_RS00740 (RN80_00745) - 134261..135223 (+) 963 WP_060627184.1 asparaginase -
  RN80_RS00750 (RN80_00755) ccpA 135460..136470 (-) 1011 WP_001090628.1 catabolite control protein A Regulator
  RN80_RS00755 (RN80_00760) - 136709..137026 (+) 318 WP_000886035.1 DUF960 domain-containing protein -
  RN80_RS00760 (RN80_00765) folK 137072..137884 (-) 813 WP_049492759.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  RN80_RS00765 (RN80_00770) folE 138043..138597 (-) 555 WP_000380916.1 GTP cyclohydrolase I FolE -
  RN80_RS00770 (RN80_00775) - 138578..139900 (-) 1323 WP_060627185.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  RN80_RS00775 (RN80_00780) folP 139902..140876 (-) 975 WP_060627186.1 dihydropteroate synthase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37155.16 Da        Isoelectric Point: 5.3350

>NTDB_id=155972 RN80_RS00750 WP_001090628.1 135460..136470(-) (ccpA) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVTYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGISYSEGLVFESKYTYEDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEEFEIITSDDSQVSRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=155972 RN80_RS00750 WP_001090628.1 135460..136470(-) (ccpA) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGAGTTTCAATGGCGACAGTTAGCCGTGTAGT
CAATGGCAATAAGAATGTAAAAGAGAACACCCGTAAAAAAGTGCTTGAGGTGATTGACCGTTTGGATTACCGTCCAAATG
CAGTGGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTTGTGATCCCCAATATCACTAATGGTTATTTCTCA
ACGCTTGCCAAAGGGATTGATGATATCGCTGAAATGTACAAGTATAACATCGTCCTTGCTAATAGTGATGAGGATGATGA
CAAGGAAGTTTCAGTTGTCAATACCCTGTTTTCTAAGCAAGTGGATGGTATCATCTTTATGGGGTACCACTTGACTGAAA
AAATTCGTTCAGAGTTTTCTCGTTCTCGAACACCAGTTGTTCTTGCGGGAACAGTAGATGTGGAACACCAGCTTCCAAGT
GTCAATATTGACTACAAACAAGCTACGATTGATGCAGTGACCTACCTTGCTAAAGAAAATGAGCGCATTGCTTTTGTTAG
CGGTCCACTAGTGGATGATATCAATGGTAAGGTTCGTTTGGTTGGTTACAAGGAAGCCTTGAAAAAAGCAGGGATTTCTT
ATAGCGAAGGATTGGTATTTGAGTCTAAATACACTTATGAAGACGGTTATGCCTTGGCAGAACGCTTAATTTCATCAAAT
GCAACTGCAGCAGTTGTAACAGGTGATGAACTGGCAGCAGGTGTCTTGAACGGCCTTGCTGATAAGGGCGTATCAGTACC
AGAAGAGTTTGAAATTATTACTAGTGATGATTCGCAAGTCTCACGCTTTACCCGTCCAAACTTGACAACTATCGCCCAAC
CTCTTTATGACCTTGGCGCTATTAGCATGCGTATGTTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTCGTTCAACACGAAAACGGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HAD8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

95.238

100

0.952

  ccpA Streptococcus gordonii str. Challis substr. CH1

89.222

99.405

0.887

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment