Detailed information NTG0155770

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: AMQ28_RS09865
• Genome accession: NZ_CP012608
• Coordinates: 2084947..2085387 (+)
• Length: 146 a.a.
• NCBI ID: WP_053579445.1
• Uniprot ID: -
• Organism: Acinetobacter sp. TTH0-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2079947..2090387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMQ28_RS09855 (AMQ28_09860)	-	2080557..2081333 (+)	777	WP_053579443.1	PilX N-terminal domain-containing pilus assembly protein	-
AMQ28_RS09860 (AMQ28_09865)	-	2081349..2084939 (+)	3591	WP_053579444.1	hypothetical protein	-
AMQ28_RS09865 (AMQ28_09870)	comE	2084947..2085387 (+)	441	WP_053579445.1	type IV pilin protein	Machinery gene
AMQ28_RS09870 (AMQ28_09875)	-	2085381..2085851 (+)	471	WP_053579446.1	type IV pilin protein	-
AMQ28_RS09875 (AMQ28_09880)	rpsP	2085997..2086254 (+)	258	WP_004718284.1	30S ribosomal protein S16	-
AMQ28_RS09880 (AMQ28_09885)	rimM	2086285..2086833 (+)	549	WP_053579447.1	ribosome maturation factor RimM	-
AMQ28_RS09885 (AMQ28_09890)	trmD	2086891..2087631 (+)	741	WP_053579448.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AMQ28_RS09890 (AMQ28_09895)	rplS	2087780..2088154 (+)	375	WP_053579449.1	50S ribosomal protein L19	-
AMQ28_RS09895 (AMQ28_09900)	-	2088214..2089185 (-)	972	WP_053579450.1	esterase/lipase family protein	-
AMQ28_RS09900 (AMQ28_09905)	-	2089359..2090342 (-)	984	WP_053580293.1	lipase family alpha/beta hydrolase	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16114.51 Da
• Isoelectric Point: 9.9369

>NTDB_id=155770 AMQ28_RS09865 WP_053579445.1 2084947..2085387(+) (comE) [Acinetobacter sp. TTH0-4]
MNKQTGFTLIELMVVVSIIAIIAAIAIPSYQAYIRRAETSKAQQEVKRIATLLERHKARNFSYKGFDLSTQTINTPRTYS
FELKDGSDTTKLLNATTASGHLWVLKAITTDVKNYNYLITSTGIRCKNLTAANITYTGCGAGGEAW

Nucleotide

• Length: 441 bp

>NTDB_id=155770 AMQ28_RS09865 WP_053579445.1 2084947..2085387(+) (comE) [Acinetobacter sp. TTH0-4]
ATGAACAAACAAACAGGTTTTACCTTAATCGAGCTAATGGTGGTGGTAAGTATTATTGCAATTATCGCTGCCATTGCAAT
TCCATCCTATCAGGCCTATATTCGAAGAGCAGAGACATCGAAAGCGCAGCAAGAAGTGAAGCGGATAGCGACACTACTTG
AGCGCCATAAAGCCCGAAACTTTAGTTATAAAGGTTTTGATTTATCTACACAGACGATTAATACCCCAAGAACGTACAGT
TTTGAATTAAAAGATGGCTCAGATACTACGAAGTTGCTAAATGCAACTACTGCCTCAGGGCATTTGTGGGTACTTAAAGC
TATTACAACTGATGTTAAAAATTATAATTACTTAATCACAAGTACAGGAATACGTTGCAAAAATTTAACAGCAGCAAATA
TTACCTATACGGGATGTGGTGCGGGAGGGGAGGCATGGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-26)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-100)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	47.853	100	0.534
pilY2	Acinetobacter baumannii D1279779	46.667	100	0.479