Detailed information NTG0155586

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AN158_RS16565
• Genome accession: NZ_CP012587
• Coordinates: 3558056..3558757 (+)
• Length: 233 a.a.
• NCBI ID: WP_069371032.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain CA-17
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3553056..3563757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AN158_RS16530 (AN158_16510)	kdsB	3553579..3554340 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AN158_RS16535 (AN158_16515)	-	3554352..3555332 (+)	981	WP_069371031.1	DNA polymerase III subunit delta'	-
AN158_RS16540 (AN158_16520)	-	3555344..3555685 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
AN158_RS16545 (AN158_16525)	-	3555703..3556476 (+)	774	WP_000497298.1	TatD family hydrolase	-
AN158_RS16550 (AN158_16530)	-	3556514..3557122 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AN158_RS16555 (AN158_16535)	-	3557132..3557686 (+)	555	WP_000841373.1	type II secretion system protein	-
AN158_RS16560 (AN158_16540)	xcpV	3557676..3558056 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AN158_RS16565 (AN158_16545)	xcpW	3558056..3558757 (+)	702	WP_069371032.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AN158_RS16570 (AN158_16550)	gspK	3558757..3559716 (+)	960	WP_069371033.1	type II secretion system minor pseudopilin GspK	-
AN158_RS16575 (AN158_16555)	-	3559947..3560543 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
AN158_RS16580 (AN158_16560)	ung	3560594..3561307 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
AN158_RS16585 (AN158_16565)	-	3561304..3562428 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AN158_RS16590 (AN158_16570)	tadA	3562435..3562938 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
AN158_RS16595 (AN158_16575)	-	3563008..3563451 (+)	444	WP_069371034.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.64 Da
• Isoelectric Point: 9.5501

>NTDB_id=155586 AN158_RS16565 WP_069371032.1 3558056..3558757(+) (xcpW) [Acinetobacter baumannii strain CA-17]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQIHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVIKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=155586 AN158_RS16565 WP_069371032.1 3558056..3558757(+) (xcpW) [Acinetobacter baumannii strain CA-17]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAAATTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGATTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTAGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCATAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983