Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | A214_RS07495 | Genome accession | NZ_CP015877 |
| Coordinates | 1603444..1604067 (+) | Length | 207 a.a. |
| NCBI ID | WP_003116135.1 | Uniprot ID | A0A0H2ZIF6 |
| Organism | Pseudomonas aeruginosa SJTD-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1598444..1609067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A214_RS07480 (A214_07480) | - | 1599131..1601602 (-) | 2472 | WP_017148635.1 | penicillin-binding protein 1A | - |
| A214_RS07485 (A214_07485) | pilM | 1601787..1602851 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| A214_RS07490 (A214_07490) | pilN | 1602851..1603447 (+) | 597 | WP_003141783.1 | type 4a pilus biogenesis protein PilN | - |
| A214_RS07495 (A214_07495) | pilO | 1603444..1604067 (+) | 624 | WP_003116135.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| A214_RS07500 (A214_07500) | comL/pilP | 1604064..1604588 (+) | 525 | WP_003116136.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| A214_RS07505 (A214_07505) | pilQ | 1604642..1606774 (+) | 2133 | WP_003116137.1 | type 4a pilus secretin PilQ | Machinery gene |
| A214_RS07510 (A214_07510) | aroK | 1606786..1607304 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| A214_RS07515 (A214_07515) | aroB | 1607354..1608460 (+) | 1107 | WP_016253983.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22958.35 Da Isoelectric Point: 4.9107
>NTDB_id=155518 A214_RS07495 WP_003116135.1 1603444..1604067(+) (pilO) [Pseudomonas aeruginosa SJTD-1]
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=155518 A214_RS07495 WP_003116135.1 1603444..1604067(+) (pilO) [Pseudomonas aeruginosa SJTD-1]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAAGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGCATCCTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAAGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGCATCCTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
45.596 |
93.237 |
0.425 |
| pilO | Acinetobacter baumannii D1279779 |
45.789 |
91.787 |
0.42 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.617 |
90.821 |
0.396 |