Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   A214_RS02720 Genome accession   NZ_CP015877
Coordinates   573382..573789 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa SJTD-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 568382..578789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A214_RS02700 (A214_02700) pilK 569314..570189 (-) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -
  A214_RS02705 (A214_02705) pilJ 570250..572298 (-) 2049 WP_017148569.1 chemotaxis chemoreceptor PilJ -
  A214_RS02710 (A214_02710) - 572383..572919 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  A214_RS02715 (A214_02715) pilH 572970..573335 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  A214_RS02720 (A214_02720) pilG 573382..573789 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  A214_RS02725 (A214_02725) gshB 574044..574997 (+) 954 WP_003100943.1 glutathione synthase -
  A214_RS02730 (A214_02730) - 575144..576037 (+) 894 WP_003162015.1 energy transducer TonB -
  A214_RS02735 (A214_02735) - 576086..576655 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  A214_RS02740 (A214_02740) ruvX 576655..577089 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  A214_RS02745 (A214_02745) pyrR 577201..577713 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  A214_RS02750 (A214_02750) - 577737..578741 (+) 1005 WP_017148568.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=155492 A214_RS02720 WP_003084583.1 573382..573789(-) (pilG) [Pseudomonas aeruginosa SJTD-1]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=155492 A214_RS02720 WP_003084583.1 573382..573789(-) (pilG) [Pseudomonas aeruginosa SJTD-1]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment