Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | A214_RS02715 | Genome accession | NZ_CP015877 |
| Coordinates | 572970..573335 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa SJTD-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 567970..578335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A214_RS02700 (A214_02700) | pilK | 569314..570189 (-) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
| A214_RS02705 (A214_02705) | pilJ | 570250..572298 (-) | 2049 | WP_017148569.1 | chemotaxis chemoreceptor PilJ | - |
| A214_RS02710 (A214_02710) | - | 572383..572919 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| A214_RS02715 (A214_02715) | pilH | 572970..573335 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| A214_RS02720 (A214_02720) | pilG | 573382..573789 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| A214_RS02725 (A214_02725) | gshB | 574044..574997 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| A214_RS02730 (A214_02730) | - | 575144..576037 (+) | 894 | WP_003162015.1 | energy transducer TonB | - |
| A214_RS02735 (A214_02735) | - | 576086..576655 (+) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| A214_RS02740 (A214_02740) | ruvX | 576655..577089 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| A214_RS02745 (A214_02745) | pyrR | 577201..577713 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=155491 A214_RS02715 WP_003084587.1 572970..573335(-) (pilH) [Pseudomonas aeruginosa SJTD-1]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=155491 A214_RS02715 WP_003084587.1 572970..573335(-) (pilH) [Pseudomonas aeruginosa SJTD-1]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |