Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   A7P66_RS00030 Genome accession   NZ_CP015645
Coordinates   3581..4051 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain 08-02119     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..9051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7P66_RS00010 (A7P66_00010) deoC 821..1483 (+) 663 WP_001083323.1 deoxyribose-phosphate aldolase -
  A7P66_RS00020 (A7P66_00020) - 1764..3065 (+) 1302 WP_001242310.1 pyrimidine-nucleoside phosphorylase -
  A7P66_RS00025 (A7P66_00025) - 3079..3429 (+) 351 WP_001024035.1 membrane protein -
  A7P66_RS00030 (A7P66_00030) luxS 3581..4051 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  A7P66_RS00035 (A7P66_00035) - 4362..5546 (+) 1185 WP_001291498.1 M20 family metallopeptidase -
  A7P66_RS00040 (A7P66_00040) ldmS 5546..6739 (+) 1194 WP_000183722.1 L-aspartate--L-methionine ligase LdmS -
  A7P66_RS00045 (A7P66_00045) - 7138..7809 (+) 672 WP_000120549.1 DUF2750 domain-containing protein -
  A7P66_RS00050 (A7P66_00050) coaW 7939..8742 (-) 804 WP_000862728.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=154401 A7P66_RS00030 WP_000164421.1 3581..4051(-) (luxS) [Staphylococcus aureus strain 08-02119]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=154401 A7P66_RS00030 WP_000164421.1 3581..4051(-) (luxS) [Staphylococcus aureus strain 08-02119]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404

Multiple sequence alignment