Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   A7317_RS27495 Genome accession   NZ_CP015637
Coordinates   6143140..6143547 (+) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas fluorescens strain L321     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6138140..6148547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7317_RS27465 (A7317_27435) - 6138257..6139261 (-) 1005 WP_024077901.1 aspartate carbamoyltransferase catalytic subunit -
  A7317_RS27470 (A7317_27440) pyrR 6139286..6139792 (-) 507 WP_024077900.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  A7317_RS27475 (A7317_27445) ruvX 6139876..6140313 (-) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  A7317_RS27480 (A7317_27450) - 6140313..6140882 (-) 570 WP_069077200.1 YqgE/AlgH family protein -
  A7317_RS27485 (A7317_27455) - 6140964..6141869 (-) 906 WP_024077898.1 TonB family protein -
  A7317_RS27490 (A7317_27460) gshB 6141947..6142900 (-) 954 WP_069077201.1 glutathione synthase -
  A7317_RS27495 (A7317_27465) pilG 6143140..6143547 (+) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  A7317_RS27500 (A7317_27470) pilH 6143594..6143959 (+) 366 WP_014720320.1 twitching motility response regulator PilH Machinery gene
  A7317_RS27505 (A7317_27475) - 6143972..6144496 (+) 525 WP_024077896.1 chemotaxis protein CheW -
  A7317_RS27510 (A7317_27480) - 6144493..6146544 (+) 2052 WP_024077895.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=154290 A7317_RS27495 WP_010564379.1 6143140..6143547(+) (pilG) [Pseudomonas fluorescens strain L321]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=154290 A7317_RS27495 WP_010564379.1 6143140..6143547(+) (pilG) [Pseudomonas fluorescens strain L321]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAAACCTTGTT
GAAGAATGTGGGATGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCTCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTCTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGAGTTGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCTGGGTTCGCCGCGGTAGAACAAG
CACACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment