Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | A6M16_RS07735 | Genome accession | NZ_CP015557 |
| Coordinates | 1565594..1566244 (-) | Length | 216 a.a. |
| NCBI ID | WP_024395987.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain DN13 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1560594..1571244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6M16_RS07715 (A6M16_07720) | xseA | 1560635..1561978 (-) | 1344 | WP_044674153.1 | exodeoxyribonuclease VII large subunit | - |
| A6M16_RS07720 (A6M16_07725) | - | 1562145..1563053 (+) | 909 | WP_024395989.1 | neutral zinc metallopeptidase | - |
| A6M16_RS07725 (A6M16_07730) | - | 1563262..1563813 (-) | 552 | WP_015647209.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| A6M16_RS07730 (A6M16_07735) | - | 1564204..1565592 (-) | 1389 | WP_063725331.1 | sensor histidine kinase | - |
| A6M16_RS07735 (A6M16_07740) | scnR | 1565594..1566244 (-) | 651 | WP_024395987.1 | response regulator transcription factor | Regulator |
| A6M16_RS07740 (A6M16_07745) | - | 1566476..1567177 (+) | 702 | WP_024382375.1 | CPBP family intramembrane glutamic endopeptidase | - |
| A6M16_RS07745 (A6M16_07750) | - | 1567411..1568667 (+) | 1257 | WP_063725332.1 | ISL3 family transposase | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 24668.81 Da Isoelectric Point: 4.8839
>NTDB_id=154183 A6M16_RS07735 WP_024395987.1 1565594..1566244(-) (scnR) [Streptococcus suis strain DN13]
MSRILVVEDDIVISQVVCEFLKEHGYQVESVFDGKIALERFQEEQFDLIVLDIMIPSMTGLEVLKEIRKTSQVPILMLTA
MGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGETDSIEIGAILIQPTSGAVYMEEEEVQLTKKEYEVLLYLA
KRRGKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLPLKTVVGRGYQIEGT
MSRILVVEDDIVISQVVCEFLKEHGYQVESVFDGKIALERFQEEQFDLIVLDIMIPSMTGLEVLKEIRKTSQVPILMLTA
MGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGETDSIEIGAILIQPTSGAVYMEEEEVQLTKKEYEVLLYLA
KRRGKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLPLKTVVGRGYQIEGT
Nucleotide
Download Length: 651 bp
>NTDB_id=154183 A6M16_RS07735 WP_024395987.1 1565594..1566244(-) (scnR) [Streptococcus suis strain DN13]
ATGTCAAGGATCTTGGTTGTCGAGGATGACATAGTTATTAGTCAAGTTGTTTGTGAGTTTTTAAAAGAACATGGTTATCA
GGTAGAATCTGTTTTTGATGGAAAGATTGCTTTAGAAAGGTTTCAAGAAGAACAATTCGATTTAATTGTTTTAGATATCA
TGATTCCGTCTATGACAGGTTTGGAAGTACTGAAGGAAATTCGCAAAACTTCTCAGGTTCCAATTTTGATGCTGACAGCC
ATGGGTGACGAATATACACAGCTTATTAGTTTTAATCAGATTATAAGTGATTATGTTGTTAAACCGTTTTCACCAACTAT
ATTGGTAAAACGGATTGAGAATATTTTGAGAGGAAAAGGAGAGACAGATAGCATTGAGATAGGAGCAATTCTTATTCAAC
CAACTAGCGGGGCAGTTTATATGGAAGAAGAAGAAGTTCAATTGACGAAAAAAGAATATGAAGTTTTATTATATTTAGCT
AAACGACGTGGGAAAATTGTTAGTCGTGATAACTTGATGATGGGAATATGGGGATATACGGAATTGGATAGTCGTGTCTT
AGATAATCATATCAAGAATATCCGTAAGAAATTGCCGTCACTTCCTTTGAAGACAGTAGTTGGTCGTGGTTATCAAATAG
AGGGTACTTAA
ATGTCAAGGATCTTGGTTGTCGAGGATGACATAGTTATTAGTCAAGTTGTTTGTGAGTTTTTAAAAGAACATGGTTATCA
GGTAGAATCTGTTTTTGATGGAAAGATTGCTTTAGAAAGGTTTCAAGAAGAACAATTCGATTTAATTGTTTTAGATATCA
TGATTCCGTCTATGACAGGTTTGGAAGTACTGAAGGAAATTCGCAAAACTTCTCAGGTTCCAATTTTGATGCTGACAGCC
ATGGGTGACGAATATACACAGCTTATTAGTTTTAATCAGATTATAAGTGATTATGTTGTTAAACCGTTTTCACCAACTAT
ATTGGTAAAACGGATTGAGAATATTTTGAGAGGAAAAGGAGAGACAGATAGCATTGAGATAGGAGCAATTCTTATTCAAC
CAACTAGCGGGGCAGTTTATATGGAAGAAGAAGAAGTTCAATTGACGAAAAAAGAATATGAAGTTTTATTATATTTAGCT
AAACGACGTGGGAAAATTGTTAGTCGTGATAACTTGATGATGGGAATATGGGGATATACGGAATTGGATAGTCGTGTCTT
AGATAATCATATCAAGAATATCCGTAAGAAATTGCCGTCACTTCCTTTGAAGACAGTAGTTGGTCGTGGTTATCAAATAG
AGGGTACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
38.767 |
100 |
0.407 |
| micA | Streptococcus pneumoniae Cp1015 |
38.667 |
100 |
0.403 |
| vicR | Streptococcus mutans UA159 |
37.168 |
100 |
0.389 |