Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | A6M16_RS03020 | Genome accession | NZ_CP015557 |
| Coordinates | 587672..588268 (+) | Length | 198 a.a. |
| NCBI ID | WP_014637682.1 | Uniprot ID | A0AA96ZYK5 |
| Organism | Streptococcus suis strain DN13 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 582672..593268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6M16_RS03005 (A6M16_03005) | vicX | 582954..583757 (+) | 804 | WP_044681030.1 | MBL fold metallo-hydrolase | Regulator |
| A6M16_RS03010 | vga(F) | 584114..585499 (+) | 1386 | WP_063725192.1 | ABC-F type ribosomal protection protein Vga(F) | - |
| A6M16_RS03015 (A6M16_03020) | pbp2b | 585591..587663 (+) | 2073 | WP_063725193.1 | penicillin-binding protein PBP2B | - |
| A6M16_RS03020 (A6M16_03025) | recR | 587672..588268 (+) | 597 | WP_014637682.1 | recombination mediator RecR | Machinery gene |
| A6M16_RS03025 (A6M16_03030) | - | 588373..589419 (+) | 1047 | WP_024395244.1 | D-alanine--D-alanine ligase | - |
| A6M16_RS03030 (A6M16_03035) | - | 589507..589887 (+) | 381 | WP_024395245.1 | OsmC family protein | - |
| A6M16_RS03035 (A6M16_03040) | - | 589889..590965 (+) | 1077 | WP_024395246.1 | ABC transporter permease | - |
| A6M16_RS03040 (A6M16_03045) | - | 590975..591643 (+) | 669 | WP_024395247.1 | ABC transporter ATP-binding protein | - |
| A6M16_RS03045 (A6M16_03050) | - | 591897..593258 (+) | 1362 | WP_024395248.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21707.83 Da Isoelectric Point: 4.4829
>NTDB_id=154151 A6M16_RS03020 WP_014637682.1 587672..588268(+) (recR) [Streptococcus suis strain DN13]
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLTYCSICGNLTDQDPCGICQDTSRDQS
TILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDDINLKTLLTRLMENEVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFAKNLLAAKRDLTYCSICGNLTDQDPCGICQDTSRDQS
TILIVEDSRDVTALENIQEYHGLYHVLHGLISPMNGIGPDDINLKTLLTRLMENEVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=154151 A6M16_RS03020 WP_014637682.1 587672..588268(+) (recR) [Streptococcus suis strain DN13]
ATGCTCTATCCAACTCCCATAGCTAAATTAATTGACAGTTATTCGAAACTACCAGGAATCGGTATTAAAACAGCTACGCG
TCTAGCCTTTTATACCATTGGTATGGAAGATGATGTAGTCAACGAATTTGCTAAAAATCTCCTGGCGGCTAAGAGAGATT
TGACCTATTGTTCCATTTGCGGCAATCTGACAGACCAGGACCCTTGCGGTATTTGTCAAGATACCAGCCGTGACCAGTCG
ACCATTTTAATTGTAGAAGATAGTCGAGATGTGACAGCCTTGGAAAATATCCAAGAATACCACGGTCTTTACCATGTCTT
GCATGGCTTGATTTCCCCGATGAATGGCATTGGACCAGACGATATTAACTTAAAGACCTTGTTAACTCGTCTAATGGAAA
ATGAAGTGACAGAAGTCATTGTAGCGACAAATGCAACAGCAGATGGTGAAGCGACATCCATGTACATCTCACGTGTCCTC
AAACCTGCGGGAATCAAAGTAACCCGACTAGCTCGTGGCTTAGCGGTAGGCAGTGATATTGAATATGCAGATGAAGTGAC
CCTGTTGAGGGCTATTGAAAATCGCACAGAGCTATAG
ATGCTCTATCCAACTCCCATAGCTAAATTAATTGACAGTTATTCGAAACTACCAGGAATCGGTATTAAAACAGCTACGCG
TCTAGCCTTTTATACCATTGGTATGGAAGATGATGTAGTCAACGAATTTGCTAAAAATCTCCTGGCGGCTAAGAGAGATT
TGACCTATTGTTCCATTTGCGGCAATCTGACAGACCAGGACCCTTGCGGTATTTGTCAAGATACCAGCCGTGACCAGTCG
ACCATTTTAATTGTAGAAGATAGTCGAGATGTGACAGCCTTGGAAAATATCCAAGAATACCACGGTCTTTACCATGTCTT
GCATGGCTTGATTTCCCCGATGAATGGCATTGGACCAGACGATATTAACTTAAAGACCTTGTTAACTCGTCTAATGGAAA
ATGAAGTGACAGAAGTCATTGTAGCGACAAATGCAACAGCAGATGGTGAAGCGACATCCATGTACATCTCACGTGTCCTC
AAACCTGCGGGAATCAAAGTAACCCGACTAGCTCGTGGCTTAGCGGTAGGCAGTGATATTGAATATGCAGATGAAGTGAC
CCTGTTGAGGGCTATTGAAAATCGCACAGAGCTATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
87.374 |
100 |
0.874 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
64.646 |
100 |
0.646 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.256 |
98.485 |
0.495 |