Detailed information NTG0154028

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: FORC36_RS10465
• Genome accession: NZ_CP015512
• Coordinates: 2148606..2150855 (-)
• Length: 749 a.a.
• NCBI ID: WP_085761224.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_036
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2143606..2155855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC36_RS10440 (FORC36_1939)	-	2143940..2144728 (-)	789	WP_085761222.1	sensor domain-containing diguanylate cyclase	-
FORC36_RS10445 (FORC36_1940)	kdsB	2144900..2145655 (-)	756	WP_011150831.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FORC36_RS10450 (FORC36_1941)	-	2145655..2145834 (-)	180	WP_011079973.1	Trm112 family protein	-
FORC36_RS10455 (FORC36_1942)	lpxK	2145815..2146822 (-)	1008	WP_011150832.1	tetraacyldisaccharide 4'-kinase	-
FORC36_RS10460 (FORC36_1943)	msbA	2146822..2148573 (-)	1752	WP_085761223.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
FORC36_RS10465 (FORC36_1944)	comEC	2148606..2150855 (-)	2250	WP_085761224.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FORC36_RS10470 (FORC36_1945)	-	2150864..2151373 (+)	510	WP_011079969.1	DUF2062 domain-containing protein	-
FORC36_RS10475 (FORC36_1946)	lolE	2151568..2152812 (-)	1245	WP_011079968.1	lipoprotein-releasing ABC transporter permease subunit LolE	-
FORC36_RS10480 (FORC36_1947)	lolD	2152824..2153507 (-)	684	WP_011079967.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
FORC36_RS10485 (FORC36_1948)	lolC	2153500..2154705 (-)	1206	WP_085761225.1	lipoprotein-releasing ABC transporter permease subunit LolC	-
FORC36_RS10490 (FORC36_1949)	-	2154971..2155540 (+)	570	WP_011079965.1	hypothetical protein	-

Sequence

Protein

• Length: 749 a.a.
• Molecular weight: 83999.10 Da
• Isoelectric Point: 8.5406

>NTDB_id=154028 FORC36_RS10465 WP_085761224.1 2148606..2150855(-) (comEC) [Vibrio vulnificus strain FORC_036]
MTLLGNNWLLASFSATLISASYWPLMPSWPWLMLIVVAIFIIIVRKTCRYLLGVTIALLIAISAGNLMQWQVKTLFQAGE
NITINGAVDSPFKQISHGYEGVVSITAINNSHLVWTLRPKVRLISPIPLGQGDQIVAHVTLKRVYGLLNEAGFDAERFAV
SQGIVGRATIDDSRSWRLVSVKGGRQALIEKAQQLLVRSDHTGYLLGLSFGLRDDITDEQWQQLKQSGLIHLLSISGLHI
GMAFGIGYWLGHWLRFGRLTLVWLPLAIGLSLSWSYAWLAGFTLPTQRAIVFVTLVALFSFTSGQVGRWTVLLLALAFCL
AMSPFSALSTSLWLSFLAVSCVFLVVDLRESSSSWIGKMKSVFCIQGMLLLYLAPVTAYFFSGLSLAAWLYNFLFIPWFS
LVVVPVIFVALVLTALDMMPVASMLWQLADLSLWPLTYAMPYAHLGWWGLSSFQVVLVALCALAVMLRHVIRWQLSVVLI
ILLSISSLSVHSLSRTRIDVLDVGHGLAVLIEKDGKTLLYDTGKSWHGGSIAQQVIEPILLSRGSRSLDGVIISHQDDDH
AGGLPYLQQNMRPQWVRSSHYLSDFPCVKGHDFEWQGLKMTVLWPPRQVTRAYNPHSCVIRMEDEENQFSLLMTGDIDAL
AEWILIRDPEQLNSDVVLVPHHGSQTSSIEPFVNAVQAGVAIASLAKGNQWGMPQPQVVETYRRHRTQWFDTGELGQITL
YVEQRNWRIVSRRDTFNAWYRQMLRNQVE

Nucleotide

• Length: 2250 bp

>NTDB_id=154028 FORC36_RS10465 WP_085761224.1 2148606..2150855(-) (comEC) [Vibrio vulnificus strain FORC_036]
ATGACTCTCTTAGGTAACAATTGGTTATTGGCTTCTTTTTCAGCAACCCTTATTTCGGCAAGCTACTGGCCGCTTATGCC
TTCCTGGCCTTGGTTAATGCTAATTGTTGTTGCCATCTTTATCATTATTGTGCGTAAAACGTGTCGTTACTTGCTGGGGG
TGACCATCGCACTTTTGATTGCCATTTCGGCTGGTAACCTTATGCAATGGCAAGTAAAGACCCTATTTCAGGCAGGGGAG
AATATTACCATAAATGGCGCCGTTGACAGCCCTTTTAAGCAAATAAGTCACGGTTATGAAGGTGTTGTTAGTATCACAGC
AATAAATAATAGTCATTTAGTGTGGACCCTGCGACCTAAAGTGCGTTTGATCTCACCCATTCCTCTTGGGCAGGGGGATC
AAATCGTAGCGCATGTGACTCTAAAACGAGTCTATGGGTTACTCAATGAAGCAGGGTTTGATGCCGAACGTTTTGCTGTC
AGCCAAGGCATCGTTGGACGGGCAACTATTGATGATTCTCGCTCTTGGCGTTTGGTCTCCGTGAAGGGAGGGCGACAAGC
GCTGATCGAAAAAGCTCAGCAGCTACTGGTTCGTAGCGATCATACCGGTTATTTACTTGGCTTAAGCTTTGGTCTTCGCG
ACGACATTACCGACGAGCAATGGCAGCAACTCAAGCAAAGTGGTTTGATACATCTACTTTCTATCTCAGGGCTGCACATT
GGTATGGCTTTTGGTATCGGTTACTGGCTCGGGCATTGGTTGCGTTTTGGACGGCTTACTCTTGTTTGGCTGCCGTTGGC
TATTGGACTGAGTCTCAGTTGGAGTTATGCGTGGCTGGCTGGTTTTACTCTGCCAACGCAAAGAGCCATTGTCTTTGTCA
CGTTAGTCGCCTTGTTCTCGTTTACGTCGGGGCAAGTCGGTCGCTGGACAGTCTTGCTGTTGGCACTGGCCTTCTGTCTT
GCGATGTCGCCATTTTCTGCCCTTTCTACCAGTCTCTGGCTCTCGTTTCTTGCTGTCAGTTGCGTCTTTCTGGTGGTTGA
TCTCCGTGAGTCGTCTTCATCTTGGATTGGCAAAATGAAAAGCGTATTTTGCATCCAAGGTATGCTGCTGCTTTATCTCG
CACCTGTGACTGCTTACTTCTTTTCCGGTTTGAGTCTGGCCGCCTGGCTGTATAACTTCCTGTTTATTCCCTGGTTTAGT
TTGGTGGTGGTGCCTGTTATCTTTGTTGCACTCGTGCTGACTGCGCTGGATATGATGCCTGTAGCCAGTATGCTATGGCA
GTTAGCGGATTTAAGTTTATGGCCATTAACTTACGCTATGCCTTACGCCCACTTAGGTTGGTGGGGGCTGTCTTCTTTTC
AGGTGGTGTTGGTCGCGTTGTGCGCGCTCGCTGTGATGCTGAGACATGTTATTCGCTGGCAACTCTCTGTCGTTCTGATC
ATTTTGCTCAGCATTTCTTCACTATCGGTTCACTCTCTTTCTCGCACCCGAATTGACGTTTTAGATGTTGGCCATGGGCT
CGCCGTATTGATTGAGAAAGACGGTAAAACGCTGCTTTATGACACTGGAAAGTCTTGGCATGGTGGCAGTATTGCGCAGC
AAGTGATTGAGCCTATTTTATTGAGTCGGGGTAGTAGAAGCCTTGATGGGGTGATCATCAGCCATCAAGATGACGATCAT
GCAGGCGGCTTGCCCTATTTGCAGCAAAACATGCGCCCACAATGGGTAAGGAGTAGTCATTACTTGAGTGATTTTCCGTG
TGTTAAAGGTCACGACTTTGAGTGGCAAGGGCTCAAAATGACCGTGCTTTGGCCGCCAAGGCAAGTGACTCGTGCCTACA
ATCCCCACTCCTGTGTGATTCGTATGGAGGATGAGGAAAATCAGTTTTCACTTTTGATGACTGGTGATATTGACGCTTTG
GCTGAGTGGATTCTGATTCGTGATCCTGAACAGCTAAACAGCGATGTGGTATTGGTGCCGCATCATGGCAGTCAAACTTC
GTCGATTGAGCCTTTTGTGAACGCCGTCCAGGCAGGTGTGGCAATTGCCTCGTTGGCAAAAGGAAATCAGTGGGGGATGC
CACAACCGCAAGTGGTCGAGACTTATCGACGACATCGCACGCAGTGGTTTGATACCGGTGAGCTGGGTCAGATAACGTTG
TATGTGGAACAGAGAAACTGGCGAATCGTCTCAAGACGCGACACTTTCAACGCTTGGTATAGGCAGATGCTGCGTAACCA
AGTAGAATAG

Domains

Predicted by InterProScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (503-682)

• Competence protein (Competence) (208-468)

• Domain of unknown function (DUF4131) (DUF4131) (27-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Vibrio parahaemolyticus RIMD 2210633	45.551	100	0.458
comEC	Vibrio campbellii strain DS40M4	45.238	100	0.457
comEC	Vibrio cholerae strain A1552	43.576	100	0.439