Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   V471_RS03120 Genome accession   NZ_CP015283
Coordinates   597565..598002 (-) Length   145 a.a.
NCBI ID   WP_014633775.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 592565..603002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS03100 (V471_03070) argR 593741..594169 (+) 429 WP_172453860.1 arginine repressor -
  V471_RS03105 (V471_03075) - 594169..594528 (+) 360 WP_084871095.1 YlbF family regulator -
  V471_RS03110 (V471_03080) hexA 594521..597079 (+) 2559 WP_084871096.1 DNA mismatch repair protein MutS Machinery gene
  V471_RS03115 (V471_03085) - 597113..597568 (-) 456 WP_084871097.1 DUF3021 domain-containing protein -
  V471_RS03120 (V471_03090) brsR 597565..598002 (-) 438 WP_014633775.1 LytTR family DNA-binding domain-containing protein Regulator
  V471_RS03125 (V471_03095) - 598181..598486 (+) 306 WP_002886319.1 hypothetical protein -
  V471_RS03130 (V471_03100) hexB 598536..600479 (+) 1944 WP_084869677.1 DNA mismatch repair endonuclease MutL Machinery gene
  V471_RS03135 (V471_03105) - 600610..600831 (+) 222 WP_002886321.1 hypothetical protein -
  V471_RS03140 (V471_03110) ruvA 600989..601579 (+) 591 WP_004181981.1 Holliday junction branch migration protein RuvA Machinery gene
  V471_RS03145 (V471_03115) - 601588..602142 (+) 555 WP_084871098.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 17061.66 Da        Isoelectric Point: 9.1546

>NTDB_id=153134 V471_RS03120 WP_014633775.1 597565..598002(-) (brsR) [Streptococcus salivarius strain ATCC 25975]
MKIKVQIDSVFQEEMLQIQAPSRTPKIQQVVEFVESLDDNQRLKGKKDGETYFIESNAISRIYIENRQVLAETIQGEYHL
GLRLYQVLEKLPSYFIKISQSEIVNLKEIERFNITPNGLVEIHLKNKETTYSSRRYLKAIKEKLQ

Nucleotide


Download         Length: 438 bp        

>NTDB_id=153134 V471_RS03120 WP_014633775.1 597565..598002(-) (brsR) [Streptococcus salivarius strain ATCC 25975]
ATGAAAATAAAAGTTCAGATTGACTCGGTATTTCAAGAAGAAATGTTGCAGATTCAGGCACCTAGTCGGACGCCCAAGAT
TCAGCAAGTGGTCGAGTTTGTCGAATCTTTGGATGATAACCAACGACTCAAAGGAAAAAAAGATGGCGAAACTTATTTCA
TCGAGTCTAATGCTATTTCCAGAATCTACATCGAAAATCGTCAAGTTCTAGCTGAAACTATTCAAGGAGAGTACCACTTA
GGCTTACGTCTCTATCAAGTTTTAGAAAAACTGCCATCTTACTTTATCAAAATCTCACAATCAGAGATTGTCAACCTCAA
AGAAATTGAACGCTTCAACATTACCCCTAACGGCCTCGTTGAAATTCACCTTAAAAACAAGGAAACCACCTACTCATCAC
GCCGTTACCTCAAAGCAATAAAGGAGAAATTACAATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.806

99.31

0.366

Multiple sequence alignment