Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   AEI26_RS06790 Genome accession   NZ_CP012212
Coordinates   1293491..1294459 (+) Length   322 a.a.
NCBI ID   WP_070298434.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ017CCUA     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1288491..1299459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI26_RS06765 (AEI26_06710) cdsA 1289398..1290123 (-) 726 WP_070298648.1 phosphatidate cytidylyltransferase -
  AEI26_RS06770 (AEI26_06715) - 1290132..1290470 (-) 339 WP_070298647.1 hypothetical protein -
  AEI26_RS06775 (AEI26_06720) - 1290472..1291779 (-) 1308 WP_115801400.1 NFACT family protein -
  AEI26_RS06780 (AEI26_06725) mobA 1291841..1292416 (+) 576 WP_070299083.1 molybdenum cofactor guanylyltransferase -
  AEI26_RS06785 (AEI26_06730) pldA 1292413..1293405 (+) 993 WP_115801401.1 phospholipase A -
  AEI26_RS06790 (AEI26_06735) ceuB 1293491..1294459 (+) 969 WP_070298434.1 ABC transporter permease Machinery gene
  AEI26_RS06795 (AEI26_06740) ceuC 1294452..1295390 (+) 939 WP_070298433.1 iron chelate uptake ABC transporter family permease subunit -
  AEI26_RS06800 (AEI26_06745) ceuD 1295387..1296142 (+) 756 WP_002871403.1 ABC transporter ATP-binding protein -
  AEI26_RS06805 (AEI26_06750) ceuB 1296155..1297147 (+) 993 WP_002862029.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI26_RS06810 (AEI26_06755) - 1297302..1297523 (+) 222 WP_070287103.1 hypothetical protein -
  AEI26_RS06815 (AEI26_06760) - 1297524..1297805 (+) 282 WP_070298432.1 type II toxin-antitoxin system RelE/ParE family toxin -
  AEI26_RS06825 (AEI26_06770) - 1298165..1298719 (-) 555 WP_070298431.1 hypothetical protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35455.43 Da        Isoelectric Point: 9.6678

>NTDB_id=152328 AEI26_RS06790 WP_070298434.1 1293491..1294459(+) (ceuB) [Campylobacter jejuni strain CJ017CCUA]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLIRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYMQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152328 AEI26_RS06790 WP_070298434.1 1293491..1294459(+) (ceuB) [Campylobacter jejuni strain CJ017CCUA]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAATTAGAAATCATAACTCTCATAAGAATTCCTA
GACTTATAGCGATTTTACTCACGGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTGTATTTGCGCTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATGCAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTGATGATTGTAAGCATTATTACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTCTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGTTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991


Multiple sequence alignment