Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI26_RS06745 Genome accession   NZ_CP012212
Coordinates   1285415..1285930 (-) Length   171 a.a.
NCBI ID   WP_070298888.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ017CCUA     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1280415..1290930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI26_RS06725 (AEI26_06670) - 1281101..1282027 (-) 927 Protein_1306 flagellin hook IN motif-containing protein -
  AEI26_RS06730 (AEI26_06675) - 1282029..1282241 (-) 213 WP_251823129.1 hypothetical protein -
  AEI26_RS06735 (AEI26_06680) - 1282312..1284159 (-) 1848 WP_070298889.1 motility associated factor glycosyltransferase family protein -
  AEI26_RS06740 (AEI26_06685) - 1284159..1285415 (-) 1257 WP_115801398.1 DUF2920 family protein -
  AEI26_RS06745 (AEI26_06690) ctsG 1285415..1285930 (-) 516 WP_070298888.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI26_RS06750 (AEI26_06695) tsaD 1285931..1286938 (-) 1008 WP_070298887.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI26_RS06755 (AEI26_06700) - 1286935..1288329 (-) 1395 WP_115801399.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI26_RS06760 (AEI26_06705) dxr 1288331..1289401 (-) 1071 WP_070298649.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI26_RS06765 (AEI26_06710) cdsA 1289398..1290123 (-) 726 WP_070298648.1 phosphatidate cytidylyltransferase -
  AEI26_RS06770 (AEI26_06715) - 1290132..1290470 (-) 339 WP_070298647.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18667.49 Da        Isoelectric Point: 6.4683

>NTDB_id=152327 AEI26_RS06745 WP_070298888.1 1285415..1285930(-) (ctsG) [Campylobacter jejuni strain CJ017CCUA]
MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSS
FNGTKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152327 AEI26_RS06745 WP_070298888.1 1285415..1285930(-) (ctsG) [Campylobacter jejuni strain CJ017CCUA]
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCTGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAGT
TTTAACGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAGGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCAAGCAATAAAGCTTGCGTGATCTTAAGTAAGAATGAAAATTTTAAAAATCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.737

100

0.947

Multiple sequence alignment