Detailed information NTG0152195

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ACZ81_RS14695
• Genome accession: NZ_CP012202
• Coordinates: 3389270..3390163 (+)
• Length: 297 a.a.
• NCBI ID: WP_061486398.1
• Uniprot ID: -
• Organism: Alteromonas macleodii strain HOT1A3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3384270..3395163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACZ81_RS14670 (ACZ81_14665)	ampD	3384802..3385341 (-)	540	WP_061486394.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
ACZ81_RS14675 (ACZ81_14670)	-	3385525..3386043 (+)	519	WP_061486395.1	retropepsin-like aspartic protease family protein	-
ACZ81_RS14680 (ACZ81_14675)	nadC	3386076..3386930 (+)	855	WP_061486396.1	carboxylating nicotinate-nucleotide diphosphorylase	-
ACZ81_RS14685 (ACZ81_14680)	-	3387500..3387928 (+)	429	WP_061486397.1	pilin	-
ACZ81_RS14690 (ACZ81_14685)	pilC	3388009..3389217 (+)	1209	WP_061486998.1	type II secretion system F family protein	Machinery gene
ACZ81_RS14695 (ACZ81_14690)	pilD	3389270..3390163 (+)	894	WP_061486398.1	prepilin peptidase	Machinery gene
ACZ81_RS14700 (ACZ81_14695)	coaE	3390182..3390793 (+)	612	WP_061486399.1	dephospho-CoA kinase	-
ACZ81_RS14705 (ACZ81_14700)	zapD	3391037..3391789 (+)	753	WP_039227984.1	cell division protein ZapD	-
ACZ81_RS14710 (ACZ81_14705)	yacG	3391931..3392158 (+)	228	WP_061486400.1	DNA gyrase inhibitor YacG	-
ACZ81_RS14715 (ACZ81_14710)	-	3392378..3393250 (+)	873	WP_061486401.1	aspartoacylase	-
ACZ81_RS14720 (ACZ81_14715)	mutT	3393370..3393753 (-)	384	WP_061486402.1	8-oxo-dGTP diphosphatase MutT	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 32916.99 Da
• Isoelectric Point: 7.0542

>NTDB_id=152195 ACZ81_RS14695 WP_061486398.1 3389270..3390163(+) (pilD) [Alteromonas macleodii strain HOT1A3]
MDAIITLSQLYPAVFYSLVFFVSLMVGSFLNVVIYRLPIMMERSWQQEYQSYFSEGEPTPNDKNSSAKEEVFNLVKPDST
CPSCGHKIRAWENIPVISYLFLKGKCAKCKVGISVRYPLVELFTALACTFAAYQFGVTSQALWAVLFTYILVALLFIDLD
KMLLPDQLTLPLLWLGLLLSTQHIFVGTTDAIIGAAAGYLSLWSVYWLFKLATGKEGMGYGDFKLLAALGAYTGWQGLPI
IILLSSFVGAIAGILIMVIQNKGKSLAIPFGPYLAVAGWLTLLFKDAIITTYLDYVL

Nucleotide

• Length: 894 bp

>NTDB_id=152195 ACZ81_RS14695 WP_061486398.1 3389270..3390163(+) (pilD) [Alteromonas macleodii strain HOT1A3]
ATGGACGCGATAATTACGCTTAGTCAGCTTTACCCTGCTGTATTCTATTCCCTAGTCTTTTTTGTAAGTTTAATGGTTGG
CAGTTTCTTGAATGTGGTGATTTACCGCTTGCCTATTATGATGGAACGCAGCTGGCAGCAAGAGTACCAAAGCTATTTTA
GCGAGGGTGAGCCGACACCTAATGATAAAAACTCATCAGCGAAAGAAGAAGTATTTAACCTTGTAAAACCAGACAGCACA
TGCCCTAGCTGCGGCCACAAAATTCGCGCATGGGAAAATATTCCTGTTATTAGCTACCTGTTCCTTAAAGGTAAGTGCGC
TAAATGCAAAGTTGGAATATCAGTTCGTTACCCGCTGGTTGAATTGTTTACTGCTTTAGCCTGTACGTTTGCGGCCTATC
AATTTGGTGTCACATCGCAAGCACTATGGGCCGTATTGTTTACCTACATACTCGTTGCTCTGCTTTTTATTGACTTAGAT
AAGATGCTATTACCTGACCAGTTGACACTGCCTCTACTGTGGTTGGGGTTACTGTTGAGCACGCAACACATTTTTGTAGG
CACCACCGACGCTATTATTGGCGCAGCGGCGGGTTATTTAAGTTTATGGTCTGTTTATTGGCTATTTAAACTTGCCACTG
GCAAAGAAGGTATGGGCTATGGCGATTTCAAGCTGCTCGCCGCACTTGGCGCTTATACGGGCTGGCAAGGCTTGCCCATT
ATTATTTTGCTCTCTTCGTTTGTTGGTGCAATTGCAGGCATACTCATAATGGTGATTCAAAACAAAGGCAAGTCGCTGGC
AATTCCTTTTGGTCCCTATCTCGCAGTGGCGGGTTGGCTGACACTGCTTTTTAAAGATGCCATTATTACCACCTATCTTG
ATTACGTACTTTAG

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (146-254)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	55.439	95.96	0.532
pilD	Vibrio campbellii strain DS40M4	53.448	97.643	0.522
pilD	Acinetobacter baumannii D1279779	50.538	93.939	0.475
pilD	Acinetobacter nosocomialis M2	50.179	93.939	0.471
pilD	Neisseria gonorrhoeae MS11	47.566	89.899	0.428