Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | VT05_RS01025 | Genome accession | NZ_CP012026 |
| Coordinates | 189450..190382 (+) | Length | 310 a.a. |
| NCBI ID | WP_003692822.1 | Uniprot ID | A0AB74EP13 |
| Organism | Neisseria gonorrhoeae strain FA19 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 184450..195382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VT05_RS01000 (VT05_00196) | - | 185004..185513 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| VT05_RS01005 (VT05_00197) | - | 185743..186324 (-) | 582 | WP_003692817.1 | superoxide dismutase | - |
| VT05_RS01010 (VT05_00198) | dnaB | 186488..187891 (+) | 1404 | WP_003692818.1 | replicative DNA helicase | - |
| VT05_RS16295 | - | 187885..187997 (-) | 113 | Protein_195 | IS5/IS1182 family transposase | - |
| VT05_RS01015 (VT05_00199) | pilH | 188148..188813 (+) | 666 | WP_003692819.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| VT05_RS01020 (VT05_00200) | pilV | 188845..189453 (+) | 609 | WP_003692820.1 | type IV pilus modification protein PilV | Machinery gene |
| VT05_RS01025 (VT05_00201) | pilJ | 189450..190382 (+) | 933 | WP_003692822.1 | PilW family protein | Machinery gene |
| VT05_RS01030 (VT05_00202) | pilK | 190361..190969 (+) | 609 | WP_003692823.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| VT05_RS01035 (VT05_00203) | pilL | 190971..191444 (+) | 474 | WP_025462870.1 | PilX family type IV pilin | Machinery gene |
| VT05_RS01045 | - | 192056..192501 (-) | 446 | Protein_201 | AzlC family ABC transporter permease | - |
| VT05_RS01050 (VT05_00205) | dut | 192667..193119 (+) | 453 | WP_003692832.1 | dUTP diphosphatase | - |
| VT05_RS01055 (VT05_00206) | dapC | 193191..194378 (+) | 1188 | WP_003692834.1 | succinyldiaminopimelate transaminase | - |
| VT05_RS01060 (VT05_00207) | yaaA | 194534..195313 (+) | 780 | WP_003692836.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 310 a.a. Molecular weight: 34030.92 Da Isoelectric Point: 9.3525
>NTDB_id=150534 VT05_RS01025 WP_003692822.1 189450..190382(+) (pilJ) [Neisseria gonorrhoeae strain FA19]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVAQKNYLFLLKKSNANKLIPIAESSNINYRGFLQVGSALIFQYGIDDVNASAATTVVSSCAAISK
PGKQIPTLEDAKKELKIPDRDKEQNGNIARQRHVVNAYAVGRIDGEGGLFRFQLNEKGEWGNPQLLAKKIKRMRVRYIYV
SGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVAQKNYLFLLKKSNANKLIPIAESSNINYRGFLQVGSALIFQYGIDDVNASAATTVVSSCAAISK
PGKQIPTLEDAKKELKIPDRDKEQNGNIARQRHVVNAYAVGRIDGEGGLFRFQLNEKGEWGNPQLLAKKIKRMRVRYIYV
SGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 933 bp
>NTDB_id=150534 VT05_RS01025 WP_003692822.1 189450..190382(+) (pilJ) [Neisseria gonorrhoeae strain FA19]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGGCGCAAAAAAACTATCTTTTTTTGTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCAATTATCGGGGTTTTCTCCAGGTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGGATCGGGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGACGGTGAGGGAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTATATCTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGGCGCAAAAAAACTATCTTTTTTTGTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCAATTATCGGGGTTTTCTCCAGGTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGGATCGGGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGACGGTGAGGGAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTATATCTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
89.457 |
100 |
0.903 |