Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   BaDB11_RS21380 Genome accession   NZ_CP014795
Coordinates   4111839..4113812 (+) Length   657 a.a.
NCBI ID   WP_003181678.1    Uniprot ID   Q65JS1
Organism   Bacillus licheniformis strain SCK B11     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 4106839..4118812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaDB11_RS21355 (BaDB11_04300) def 4107215..4107697 (+) 483 WP_009328532.1 peptide deformylase -
  BaDB11_RS21360 (BaDB11_04301) fmt 4107702..4108652 (+) 951 WP_003181670.1 methionyl-tRNA formyltransferase -
  BaDB11_RS21365 (BaDB11_04302) rsmB 4108642..4109988 (+) 1347 WP_003181671.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  BaDB11_RS21370 (BaDB11_04303) rlmN 4109988..4111073 (+) 1086 WP_080618638.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  BaDB11_RS21375 (BaDB11_04304) - 4111081..4111845 (+) 765 WP_003181675.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  BaDB11_RS21380 (BaDB11_04305) stkP 4111839..4113812 (+) 1974 WP_003181678.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  BaDB11_RS21385 (BaDB11_04306) rsgA 4113825..4114709 (+) 885 WP_003181680.1 ribosome small subunit-dependent GTPase A -
  BaDB11_RS21390 (BaDB11_04307) rpe 4114713..4115369 (+) 657 WP_003181681.1 ribulose-phosphate 3-epimerase -
  BaDB11_RS21395 (BaDB11_04308) - 4115445..4116089 (+) 645 WP_003181683.1 thiamine diphosphokinase -
  BaDB11_RS21400 spoVM 4116175..4116255 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  BaDB11_RS21405 (BaDB11_04309) rpmB 4116374..4116562 (-) 189 WP_003181685.1 50S ribosomal protein L28 -
  BaDB11_RS21410 (BaDB11_04310) - 4116850..4117212 (+) 363 WP_003181687.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 657 a.a.        Molecular weight: 72686.52 Da        Isoelectric Point: 4.8627

>NTDB_id=150255 BaDB11_RS21380 WP_003181678.1 4111839..4113812(+) (stkP) [Bacillus licheniformis strain SCK B11]
MLIGRRISGRYEILRAIGGGGMANVYLALDIILDREVAIKVLRFDFVHDADFIRRFRREAQSAASLDHPNIVSIYDVGEE
DDIYYIVMEYVEGMTLKEYINRTGPLHPKEAVQIMEQIVSAIAHAHDNQIVHRDIKPHNILIDHMGHIKVTDFGIAMALS
STTITHTNSVLGSVHYLSPEQARGGLSTKKSDIYSLGIVLFELLTARMPFEGESAVSIALKHLQSETPSVKRWNPAVPQS
IENVVLKAMAKDPFHRYEAAEEMENDLKTAFDPDRLNEKRFTIPSDDEMTKAVPIIKNLPENGSSSQSGGGEEEAAPLSK
KEKKKQAKANKKKKRKKWPLILLTVFFVLAASAVLALTVFPSLFIPKDVAVPDVAGLEYEEAVIKLEDEGFEVDPNAEDI
ADDKIEEGLIVKTDPAAGDIVKEGSTVKLYKSSGKEKTEVDDVVGQKVDAAKKLLEQKGFKNIKTEEVHDEEEAGTIIEQ
DPAAGTEIVAADDEVKLTVSLGPEAITLRDLKTYSKQAASGYLDDHQLVLVEKEAHSEDVPEGQVIKQKPEAGASVKPGD
KVEVTFSLGPKQKPVKTVTEKIDIPYEPGAAGEEQNVQISIDDEEHSISDVYENFKITAPAERTIKFRIAPGQKGYYQVT
INDKVVRSKTIEYPEDE

Nucleotide


Download         Length: 1974 bp        

>NTDB_id=150255 BaDB11_RS21380 WP_003181678.1 4111839..4113812(+) (stkP) [Bacillus licheniformis strain SCK B11]
GTGTTAATCGGCAGACGGATCAGCGGACGTTACGAAATCCTGCGCGCCATCGGCGGCGGGGGGATGGCGAACGTTTATTT
AGCGCTGGACATCATCCTCGACCGTGAAGTCGCGATTAAAGTGCTGCGGTTTGACTTCGTTCACGATGCCGATTTTATCA
GGCGGTTCAGACGGGAAGCGCAGTCCGCTGCAAGCCTCGACCACCCGAATATCGTCAGCATTTATGATGTCGGAGAAGAA
GATGACATCTATTATATCGTGATGGAGTATGTCGAGGGGATGACCCTGAAAGAATACATAAATCGAACAGGCCCACTTCA
TCCGAAAGAAGCGGTCCAAATCATGGAGCAGATCGTATCCGCCATCGCACATGCCCATGATAACCAGATTGTCCACCGGG
ATATTAAGCCCCACAACATTTTGATCGACCATATGGGCCACATTAAAGTGACTGATTTCGGCATCGCCATGGCGCTCAGC
TCGACGACCATCACGCACACCAACTCGGTTTTGGGCTCTGTCCATTATTTGTCGCCCGAACAGGCGAGAGGCGGATTATC
GACGAAAAAATCCGATATCTACTCGCTCGGCATCGTGCTTTTCGAGCTGCTGACGGCGCGTATGCCGTTTGAAGGAGAAT
CGGCGGTCAGCATCGCGCTGAAACATCTCCAATCAGAAACGCCGTCGGTGAAAAGATGGAACCCGGCCGTGCCGCAAAGC
ATAGAAAACGTCGTCCTGAAAGCGATGGCAAAAGATCCATTCCATCGCTATGAAGCGGCCGAAGAGATGGAAAACGATTT
GAAAACGGCTTTCGACCCGGACCGGCTCAACGAAAAGCGCTTCACGATTCCATCCGATGATGAGATGACGAAAGCTGTTC
CGATCATCAAGAATCTGCCGGAAAACGGGAGCAGCTCGCAATCCGGCGGCGGAGAAGAGGAAGCGGCTCCATTATCAAAA
AAAGAAAAGAAGAAGCAGGCAAAAGCAAACAAGAAGAAAAAAAGAAAGAAATGGCCGCTTATATTGCTGACGGTGTTTTT
CGTTCTGGCTGCGTCAGCCGTCTTGGCTTTAACGGTGTTTCCGTCGCTCTTTATTCCGAAAGATGTGGCCGTTCCCGATG
TTGCCGGCCTTGAATATGAAGAAGCCGTCATCAAGCTTGAAGACGAAGGATTTGAAGTTGATCCGAATGCTGAAGACATT
GCCGACGATAAAATTGAAGAAGGGCTGATCGTGAAGACGGACCCTGCAGCCGGCGATATCGTGAAGGAAGGTTCAACTGT
CAAGCTATATAAAAGCTCAGGCAAAGAGAAAACTGAAGTCGATGATGTGGTCGGCCAGAAAGTCGATGCCGCCAAGAAGC
TTCTTGAGCAAAAAGGCTTTAAAAACATCAAGACAGAAGAAGTGCACGATGAAGAAGAAGCGGGAACCATCATCGAACAG
GACCCTGCAGCCGGAACCGAAATCGTTGCCGCCGACGACGAGGTCAAATTAACGGTCAGCCTCGGTCCGGAAGCCATTAC
TTTAAGGGATTTAAAAACATACAGCAAACAGGCGGCTTCGGGCTATTTGGACGACCATCAGCTTGTCCTTGTCGAAAAGG
AGGCGCATTCTGAAGACGTGCCGGAAGGTCAGGTCATTAAACAAAAGCCGGAGGCGGGGGCATCAGTCAAGCCGGGAGAC
AAAGTCGAGGTCACGTTTTCGCTCGGACCTAAACAAAAGCCCGTCAAAACGGTGACCGAGAAAATTGATATTCCTTATGA
ACCGGGAGCGGCGGGCGAAGAACAAAACGTCCAAATTTCGATCGATGATGAAGAACACAGCATTTCTGACGTCTACGAAA
ATTTCAAAATCACAGCGCCGGCAGAGCGGACGATCAAATTCAGGATTGCGCCCGGCCAAAAAGGGTATTATCAAGTAACG
ATCAACGATAAAGTAGTCAGGTCAAAAACGATTGAATATCCTGAGGATGAATAA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(11-264)

PASTA domain (PASTA)

(507-567)

PASTA domain (PASTA)

(369-432)

PASTA domain (PASTA)

(439-500)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65JS1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

41.356

89.802

0.371
  stkP Streptococcus pneumoniae D39

41.186

89.802

0.37
  stkP Streptococcus pneumoniae R6

41.186

89.802

0.37
  stkP Streptococcus pneumoniae Rx1

41.017

89.802

0.368