Detailed information NTG0148927

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACG10_RS16360
• Genome accession: NZ_CP011835
• Coordinates: 3520021..3521361 (+)
• Length: 446 a.a.
• NCBI ID: WP_089169020.1
• Uniprot ID: -
• Organism: Azotobacter chroococcum strain B3
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3515021..3526361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG10_RS23835	-	3515334..3515660 (-)	327	WP_157731474.1	hypothetical protein	-
ACG10_RS16345 (ACG10_15980)	-	3516250..3517884 (-)	1635	WP_198318963.1	NAD+ synthase	-
ACG10_RS16350 (ACG10_15985)	-	3518111..3518353 (+)	243	WP_089169019.1	PP0621 family protein	-
ACG10_RS16355 (ACG10_15990)	pilS	3518379..3519977 (+)	1599	WP_089169922.1	PAS domain-containing sensor histidine kinase	Regulator
ACG10_RS16360 (ACG10_15995)	pilR	3520021..3521361 (+)	1341	WP_089169020.1	sigma-54 dependent transcriptional regulator	Regulator
ACG10_RS16365 (ACG10_16000)	thiO	3521496..3522593 (-)	1098	WP_089169021.1	glycine oxidase ThiO	-
ACG10_RS16370 (ACG10_16005)	-	3522773..3523336 (+)	564	WP_157731475.1	GspH/FimT family pseudopilin	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49888.18 Da
• Isoelectric Point: 5.3362

>NTDB_id=148927 ACG10_RS16360 WP_089169020.1 3520021..3521361(+) (pilR) [Azotobacter chroococcum strain B3]
MSARQKALIVDDEPDIRELLEITLGRMKLDTRSARNLQEARDWLGRERFDLCLTDMRLPDGSGLELVQYIQQRHSQVPVA
MITAYGSLDTAVNALKAGAFDFLTKPVDLARLRELVATALRLHAPAIEEEAVDSRLIGDSPPMRTLRKQIAKLARSQAPV
YISGESGSGKEVVARLIHEQGPRAERPFVPVNCGAIPSELMESEFFGHRKGSFTGAIEDKQGLFQAASGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILSATHKDLAAEVAAGRFRQDLYYRLNVIELRVPPLRERREDIPALAAI
MLARLAEEAGLPPARLGEEAQEKLRSYRFPGNVRELENMLERAYTLCEDDLIQARDLRLCDTPSPGESGETSLAGIDNLE
DYLEELERRLIMQALEETRWNRTAAAERLGLSFRSMRYRLKKLGID

Nucleotide

• Length: 1341 bp

>NTDB_id=148927 ACG10_RS16360 WP_089169020.1 3520021..3521361(+) (pilR) [Azotobacter chroococcum strain B3]
ATGAGCGCCCGACAGAAAGCCCTGATCGTCGACGACGAGCCCGACATCCGCGAACTGCTGGAAATCACCCTGGGCCGGAT
GAAGCTCGACACCCGCAGCGCCCGCAACCTCCAGGAGGCGCGCGACTGGCTGGGCCGCGAGCGCTTCGATCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCAGCGGCCTGGAGCTGGTGCAGTACATCCAGCAGCGCCACTCGCAGGTCCCGGTCGCT
ATGATCACCGCCTACGGCAGCCTGGACACCGCGGTCAATGCCCTCAAGGCCGGCGCCTTCGACTTCCTGACCAAGCCGGT
CGACCTCGCCCGCCTGCGCGAGCTGGTCGCCACCGCCCTGCGCCTGCATGCACCGGCGATCGAGGAGGAAGCGGTGGACA
GCCGGCTGATCGGCGACTCGCCGCCGATGCGCACGCTGCGCAAGCAGATCGCCAAGCTGGCGCGCAGCCAGGCGCCGGTC
TACATCAGCGGCGAGTCCGGCAGCGGCAAGGAAGTGGTCGCCCGCCTGATCCACGAACAGGGGCCGCGCGCCGAACGCCC
CTTCGTCCCGGTGAACTGCGGCGCGATTCCCTCGGAACTGATGGAAAGCGAGTTCTTCGGCCATCGCAAGGGCAGCTTCA
CCGGCGCCATCGAGGACAAGCAAGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAGGTGGCCGACCTG
CCGCTGCCGATGCAGGTCAAGCTGCTGCGTGCCATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTGGT
GGTCGACGTACGCATCCTCAGCGCCACCCACAAGGATCTGGCCGCCGAGGTCGCCGCCGGCCGCTTCCGCCAGGACCTCT
ACTACCGCCTGAACGTCATCGAGCTGCGCGTGCCGCCGCTGCGCGAGCGCCGCGAGGACATTCCGGCGCTGGCGGCGATC
ATGCTGGCGCGCCTCGCGGAGGAAGCCGGCCTGCCACCGGCCCGGCTCGGCGAGGAGGCCCAGGAAAAGCTCCGCAGCTA
CCGCTTCCCGGGCAATGTGCGCGAACTGGAGAACATGCTGGAGCGGGCCTACACCCTCTGCGAGGACGACCTGATCCAGG
CCCGCGACCTGCGCCTCTGCGACACCCCGAGCCCGGGCGAGAGCGGCGAAACCTCGCTGGCCGGCATCGACAACCTCGAG
GACTACCTGGAGGAACTCGAACGCCGGCTGATCATGCAGGCCCTCGAGGAAACCCGCTGGAACCGCACCGCCGCCGCCGA
GCGCCTGGGCCTGAGCTTCCGCTCCATGCGCTACCGCCTGAAGAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Response regulator receiver domain (Response_reg) (8-116)

• Sigma-54 interaction domain (Sigma54_activat) (136-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.135	99.552	0.848
pilR	Acinetobacter baumannii strain A118	49.244	100	0.511