Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | FORC16_RS13085 | Genome accession | NZ_CP011775 |
| Coordinates | 2874388..2874978 (-) | Length | 196 a.a. |
| NCBI ID | WP_011079354.1 | Uniprot ID | A0A3Q0L3M6 |
| Organism | Vibrio vulnificus strain FORC_016 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2869388..2879978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC16_RS13065 (FORC16_2564) | aroB | 2870244..2871335 (-) | 1092 | WP_017789764.1 | 3-dehydroquinate synthase | - |
| FORC16_RS13070 (FORC16_2565) | aroK | 2871368..2871886 (-) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| FORC16_RS13075 (FORC16_2566) | pilQ | 2872088..2873872 (-) | 1785 | WP_011079356.1 | type IV pilus secretin PilQ | Machinery gene |
| FORC16_RS13080 (FORC16_2567) | pilP | 2873886..2874398 (-) | 513 | WP_060530656.1 | pilus assembly protein PilP | Machinery gene |
| FORC16_RS13085 (FORC16_2568) | pilO | 2874388..2874978 (-) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FORC16_RS13090 (FORC16_2569) | pilN | 2874971..2875561 (-) | 591 | WP_011079353.1 | PilN domain-containing protein | Machinery gene |
| FORC16_RS13095 (FORC16_2570) | pilM | 2875551..2876558 (-) | 1008 | WP_011151279.1 | type IV pilus assembly protein PilM | Machinery gene |
| FORC16_RS13100 (FORC16_2571) | - | 2876698..2879211 (+) | 2514 | WP_060530655.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22749.25 Da Isoelectric Point: 5.0836
>NTDB_id=148640 FORC16_RS13085 WP_011079354.1 2874388..2874978(-) (pilO) [Vibrio vulnificus strain FORC_016]
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
Nucleotide
Download Length: 591 bp
>NTDB_id=148640 FORC16_RS13085 WP_011079354.1 2874388..2874978(-) (pilO) [Vibrio vulnificus strain FORC_016]
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCTGCGGTTGTTGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGTTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCTGCCTTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAGGAGTTGGCGACGATGTTGGCGTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATCGATTGGGGGGAAAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCCCGCTTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCTGCGGTTGTTGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGTTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCTGCCTTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAGGAGTTGGCGACGATGTTGGCGTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATCGATTGGGGGGAAAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCCCGCTTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
73.016 |
96.429 |
0.704 |
| pilO | Vibrio cholerae strain A1552 |
67.347 |
100 |
0.673 |