Detailed information NTG0147808

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AWV81_RS14135
• Genome accession: NZ_CP014471
• Coordinates: 2610176..2610781 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. natto strain CGMCC 2108
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2605176..2615781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWV81_RS14105 (AWV81_14095)	-	2605989..2606378 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
AWV81_RS14110 (AWV81_14100)	yajC	2606435..2606701 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
AWV81_RS14115 (AWV81_14105)	tgt	2606738..2607883 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
AWV81_RS14120 (AWV81_14110)	queA	2607910..2608938 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AWV81_RS14125 (AWV81_14115)	yrzS	2608968..2609168 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
AWV81_RS14130 (AWV81_14120)	ruvB	2609161..2610165 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AWV81_RS14135 (AWV81_14125)	ruvA	2610176..2610781 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
AWV81_RS14140 (AWV81_14130)	bofC	2610920..2611432 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
AWV81_RS14145 (AWV81_14135)	csbX	2611480..2612787 (-)	1308	WP_014480439.1	MFS transporter	-
AWV81_RS14150 (AWV81_14140)	iolG	2612858..2613883 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
AWV81_RS14155 (AWV81_14145)	yrzF	2614121..2614768 (+)	648	WP_014480441.1	phosphotransferase	-
AWV81_RS23165 (AWV81_14150)	-	2614814..2614936 (-)	123	WP_003229707.1	hypothetical protein	-
AWV81_RS23745	-	2615021..2615095 (+)	75	Protein_2742	hypothetical protein	-
AWV81_RS23170 (AWV81_14155)	-	2615099..2615467 (+)	369	WP_186437837.1	DUF5412 family protein	-
AWV81_RS14170 (AWV81_14160)	-	2615474..2615614 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=147808 AWV81_RS14135 WP_003229717.1 2610176..2610781(-) (ruvA) [Bacillus subtilis subsp. natto strain CGMCC 2108]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=147808 AWV81_RS14135 WP_003229717.1 2610176..2610781(-) (ruvA) [Bacillus subtilis subsp. natto strain CGMCC 2108]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408