Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABH13_RS02055 Genome accession   NZ_CP011686
Coordinates   405625..406578 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain G341     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 400625..411578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABH13_RS02035 (ABH13_0365) - 400672..402105 (+) 1434 WP_162782989.1 sensor histidine kinase -
  ABH13_RS02040 (ABH13_0367) rapC 402258..403406 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  ABH13_RS02045 (ABH13_0368) phrC 403390..403509 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ABH13_RS19715 - 403657..403767 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  ABH13_RS02050 (ABH13_0369) - 403847..405211 (-) 1365 WP_020955323.1 aspartate kinase -
  ABH13_RS02055 (ABH13_0370) ceuB 405625..406578 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  ABH13_RS02060 (ABH13_0371) - 406568..407515 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  ABH13_RS02065 (ABH13_0372) - 407509..408267 (+) 759 WP_047935217.1 ABC transporter ATP-binding protein -
  ABH13_RS02070 (ABH13_0373) - 408289..409233 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  ABH13_RS02075 (ABH13_0374) - 409275..410699 (-) 1425 WP_047935219.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=147426 ABH13_RS02055 WP_015239156.1 405625..406578(+) (ceuB) [Bacillus velezensis strain G341]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=147426 ABH13_RS02055 WP_015239156.1 405625..406578(+) (ceuB) [Bacillus velezensis strain G341]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment