Detailed information NTG0147424

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ABH13_RS02040
• Genome accession: NZ_CP011686
• Coordinates: 402258..403406 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain G341
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 397258..408406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH13_RS02020 (ABH13_0362)	-	397679..398362 (-)	684	WP_007410265.1	ABC transporter ATP-binding protein	-
ABH13_RS02025 (ABH13_0363)	-	398377..399789 (-)	1413	WP_047935211.1	ABC transporter permease	-
ABH13_RS02030 (ABH13_0364)	-	400002..400685 (+)	684	WP_007410267.1	response regulator transcription factor	-
ABH13_RS02035 (ABH13_0365)	-	400672..402105 (+)	1434	WP_162782989.1	sensor histidine kinase	-
ABH13_RS02040 (ABH13_0367)	rapC	402258..403406 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
ABH13_RS02045 (ABH13_0368)	phrC	403390..403509 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ABH13_RS19715	-	403657..403767 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
ABH13_RS02050 (ABH13_0369)	-	403847..405211 (-)	1365	WP_020955323.1	aspartate kinase	-
ABH13_RS02055 (ABH13_0370)	ceuB	405625..406578 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
ABH13_RS02060 (ABH13_0371)	-	406568..407515 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
ABH13_RS02065 (ABH13_0372)	-	407509..408267 (+)	759	WP_047935217.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=147424 ABH13_RS02040 WP_007410270.1 402258..403406(+) (rapC) [Bacillus velezensis strain G341]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=147424 ABH13_RS02040 WP_007410270.1 402258..403406(+) (rapC) [Bacillus velezensis strain G341]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568