Detailed information NTG0146238

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: AA976_RS01985
• Genome accession: NZ_CP011484
• Coordinates: 400535..401335 (+)
• Length: 266 a.a.
• NCBI ID: WP_064436354.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain CC33C
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 395535..406335

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA976_RS01950 (AA976_01975)	pseH	396038..396580 (+)	543	WP_064436350.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
AA976_RS01955 (AA976_01980)	-	396513..397451 (-)	939	WP_033746643.1	tetraacyldisaccharide 4'-kinase	-
AA976_RS01960 (AA976_01985)	-	397448..398230 (-)	783	WP_064436351.1	NAD+ synthase	-
AA976_RS01970 (AA976_01995)	ilvC	398479..399471 (+)	993	WP_064436352.1	ketol-acid reductoisomerase	-
AA976_RS01975 (AA976_02000)	minD	399492..400298 (+)	807	WP_064436353.1	septum site-determining protein MinD	-
AA976_RS01980 (AA976_02005)	minE	400295..400528 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
AA976_RS01985 (AA976_02010)	dprA	400535..401335 (+)	801	WP_064436354.1	DNA-processing protein DprA	Machinery gene
AA976_RS01990 (AA976_02015)	dprB	401332..401754 (+)	423	WP_064436355.1	Holliday junction resolvase RuvX	Machinery gene
AA976_RS01995 (AA976_02020)	-	402019..402192 (+)	174	WP_412767741.1	sel1 repeat family protein	-
AA976_RS02000 (AA976_02025)	-	402455..402787 (+)	333	Protein_387	hypothetical protein	-
AA976_RS02005 (AA976_02030)	-	402849..403409 (+)	561	WP_064436356.1	hypothetical protein	-
AA976_RS02010 (AA976_02035)	-	403553..404434 (-)	882	WP_064436357.1	RluA family pseudouridine synthase	-
AA976_RS02015 (AA976_02040)	recJ	404434..405984 (-)	1551	WP_064436358.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29862.76 Da
• Isoelectric Point: 7.7999

>NTDB_id=146238 AA976_RS01985 WP_064436354.1 400535..401335(+) (dprA) [Helicobacter pylori strain CC33C]
MKSHFQYSTLENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=146238 AA976_RS01985 WP_064436354.1 400535..401335(+) (dprA) [Helicobacter pylori strain CC33C]
ATGAAAAGCCATTTCCAATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCACCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCCTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGTGGC
TCTATGAGTAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCTTGAACGAGAGCGACGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	98.496	100	0.985
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414