Detailed information NTG0146213

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EE66_RS04645
• Genome accession: NZ_CP011483
• Coordinates: 945970..946770 (-)
• Length: 266 a.a.
• NCBI ID: WP_064431158.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain DU15
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 940970..951770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EE66_RS04605 (EE66_04600)	-	941710..942495 (-)	786	WP_064431154.1	hypothetical protein	-
EE66_RS08080	-	942495..942876 (-)	382	Protein_885	DUF1294 domain-containing protein	-
EE66_RS08630 (EE66_04610)	-	943211..943798 (-)	588	WP_253781931.1	lysozyme	-
EE66_RS04625 (EE66_04615)	-	943895..944455 (-)	561	WP_064431156.1	hypothetical protein	-
EE66_RS04630 (EE66_04620)	-	944439..944777 (-)	339	WP_017280149.1	hypothetical protein	-
EE66_RS08635 (EE66_04625)	-	944964..945167 (-)	204	WP_253782011.1	sel1 repeat family protein	-
EE66_RS08640	-	945302..945433 (-)	132	WP_253781933.1	tetratricopeptide repeat protein	-
EE66_RS04640 (EE66_04635)	dprB	945569..945973 (-)	405	WP_064431157.1	Holliday junction resolvase RuvX	Machinery gene
EE66_RS04645 (EE66_04640)	dprA	945970..946770 (-)	801	WP_064431158.1	DNA-processing protein DprA	Machinery gene
EE66_RS04650 (EE66_04645)	minE	946782..947015 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
EE66_RS04655 (EE66_04650)	minD	947012..947818 (-)	807	WP_064431159.1	septum site-determining protein MinD	-
EE66_RS04660 (EE66_04655)	ilvC	947837..948829 (-)	993	WP_064431160.1	ketol-acid reductoisomerase	-
EE66_RS04670 (EE66_04665)	-	949078..949860 (+)	783	WP_064431161.1	NAD+ synthase	-
EE66_RS04675 (EE66_04670)	-	949857..950795 (+)	939	WP_064431162.1	tetraacyldisaccharide 4'-kinase	-
EE66_RS04680 (EE66_04675)	pseH	950728..951270 (-)	543	WP_064431163.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29809.77 Da
• Isoelectric Point: 8.9017

>NTDB_id=146213 EE66_RS04645 WP_064431158.1 945970..946770(-) (dprA) [Helicobacter pylori strain DU15]
MKSNFPYSVLENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIARNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=146213 EE66_RS04645 WP_064431158.1 945970..946770(-) (dprA) [Helicobacter pylori strain DU15]
ATGAAAAGCAATTTCCCATACAGTGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCACGAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATTGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAGAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414