Detailed information NTG0144906

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AXF35_RS13595
• Genome accession: NZ_CP014255
• Coordinates: 3006693..3007760 (-)
• Length: 355 a.a.
• NCBI ID: WP_027222818.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pascullei strain F-4185
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3001693..3012760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AXF35_RS13570 (AXF35_03365)	-	3001884..3002600 (-)	717	WP_027222813.1	dienelactone hydrolase family protein	-
AXF35_RS13575 (AXF35_03360)	-	3002875..3003741 (+)	867	WP_027222814.1	alpha/beta hydrolase	-
AXF35_RS13580 (AXF35_03355)	rpoH	3003982..3004836 (-)	855	WP_027222815.1	RNA polymerase sigma factor RpoH	-
AXF35_RS13585 (AXF35_03350)	ftsX	3005133..3006062 (-)	930	WP_027222816.1	permease-like cell division protein FtsX	-
AXF35_RS13590 (AXF35_03345)	ftsE	3006056..3006706 (-)	651	WP_027222817.1	cell division ATP-binding protein FtsE	-
AXF35_RS13595 (AXF35_03340)	pilA	3006693..3007760 (-)	1068	WP_027222818.1	signal recognition particle-docking protein FtsY	Machinery gene
AXF35_RS13600 (AXF35_03335)	-	3007823..3009148 (+)	1326	WP_027222819.1	M16 family metallopeptidase	-
AXF35_RS13605 (AXF35_03330)	-	3009145..3010449 (+)	1305	WP_027222820.1	M16 family metallopeptidase	-
AXF35_RS13610 (AXF35_03325)	rsmD	3010446..3010991 (+)	546	WP_027222821.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AXF35_RS13615 (AXF35_03320)	dotD	3011066..3011557 (+)	492	WP_027222822.1	type IVB secretion system lipoprotein DotD	-
AXF35_RS13620 (AXF35_03315)	dotC	3011538..3012449 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38871.45 Da
• Isoelectric Point: 6.1219

>NTDB_id=144906 AXF35_RS13595 WP_027222818.1 3006693..3007760(-) (pilA) [Legionella pneumophila subsp. pascullei strain F-4185]
MIKWFKRNQNSESSLDTEEQQAHAENSVESGLEEPREAIVKEPSPKESIFARFKKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQEVLKQLNEGLARKQLSNGEAVYQTLKANLQKILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNSIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=144906 AXF35_RS13595 WP_027222818.1 3006693..3007760(-) (pilA) [Legionella pneumophila subsp. pascullei strain F-4185]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAGTCAAGTTTGGACACTGAAGAACAACAGGCTCATGCCGAAAACAG
CGTGGAATCCGGGCTTGAAGAGCCTCGGGAGGCGATTGTCAAAGAGCCTTCTCCAAAAGAAAGTATTTTTGCTCGTTTTA
AGAAAGGTCTTAGCAAAACGCGCCATCAATTGGGGGAAGGCATAAGTCGGCTGCTATTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAACTCGAGACCTTATTGATTAGTGCTGATTTGGGCTTGGATACCACGCAAGAAGTATTGAAGCAATT
AAATGAAGGCCTGGCAAGAAAGCAACTATCTAATGGTGAAGCAGTTTATCAGACTCTAAAGGCAAATTTGCAAAAGATTT
TGAGTCAAGAAGAGAAACCGCTTTCCATAGAAACAGAAGATGGTTCTCCTTTTGTCATTTTAATGGTTGGTGTCAATGGC
GCCGGTAAAACAACCACGATTGGTAAATTAGCCAAACAATTCCAAAAACAGGGAAAGAAAGTGATGTTAGCTGCTGGTGA
TACGTTTCGTGCTGCTGCCGTGGAACAATTGCATGTGTGGGGCGAAAGAAATAGCATACCGGTTATTGCCCAGCATACCG
GGGCTGACAGTGCCTCAGTAATTTTTGATGCCCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACACAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTGATGCAGAAACTCGATCCCAA
AGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATCGGGCAGAATGCCTTGGCCCAGGCAAAACAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGAACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCATTTCGTTATTTAGGGGTGGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.453	96.901	0.499