Detailed information NTG0144905

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AAV30_RS02675
• Genome accession: NZ_CP011347
• Coordinates: 534943..536106 (+)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain YJ11-1-4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 529943..541106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAV30_RS02655 (AAV30_02655)	tuaH	530344..531540 (+)	1197	WP_038460049.1	teichuronic acid biosynthesis protein TuaH	-
AAV30_RS02660 (AAV30_02660)	-	531673..532749 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AAV30_RS02665 (AAV30_02665)	-	532848..534068 (-)	1221	WP_038460047.1	LCP family protein	-
AAV30_RS02670 (AAV30_02670)	-	534073..534720 (-)	648	WP_007614107.1	YigZ family protein	-
AAV30_RS02675 (AAV30_02675)	degS	534943..536106 (+)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AAV30_RS02680 (AAV30_02680)	degU	536183..536872 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AAV30_RS02685 (AAV30_02685)	-	536970..537818 (+)	849	WP_003151387.1	DegV family protein	-
AAV30_RS02690 (AAV30_02690)	comFA	537926..539311 (+)	1386	WP_038460045.1	DEAD/DEAH box helicase	Machinery gene
AAV30_RS02695 (AAV30_02695)	-	539369..539653 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
AAV30_RS02700 (AAV30_02700)	comFC	539659..540348 (+)	690	WP_199910472.1	double zinc ribbon domain-containing protein	Machinery gene
AAV30_RS02705 (AAV30_02705)	-	540422..540841 (+)	420	WP_038460041.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=144905 AAV30_RS02675 WP_007407484.1 534943..536106(+) (degS) [Bacillus velezensis strain YJ11-1-4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=144905 AAV30_RS02675 WP_007407484.1 534943..536106(+) (degS) [Bacillus velezensis strain YJ11-1-4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCATGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGCGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTTTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGATGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951