Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   AXF35_RS10425 Genome accession   NZ_CP014255
Coordinates   2280392..2282464 (+) Length   690 a.a.
NCBI ID   WP_027222209.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pascullei strain F-4185     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2275392..2287464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXF35_RS10400 (AXF35_06455) folB 2276243..2276581 (+) 339 WP_027222205.1 dihydroneopterin aldolase -
  AXF35_RS10405 (AXF35_06450) - 2276620..2277315 (-) 696 WP_027222206.1 SPOR domain-containing protein -
  AXF35_RS10410 (AXF35_06445) argS 2277315..2279075 (-) 1761 WP_027222207.1 arginine--tRNA ligase -
  AXF35_RS10415 (AXF35_06440) - 2279187..2280245 (-) 1059 WP_027222208.1 AI-2E family transporter -
  AXF35_RS10425 (AXF35_06430) recG 2280392..2282464 (+) 2073 WP_027222209.1 ATP-dependent DNA helicase RecG Machinery gene
  AXF35_RS10430 (AXF35_06425) - 2282916..2284001 (-) 1086 WP_027222210.1 hypothetical protein -
  AXF35_RS10435 (AXF35_06420) - 2284348..2285490 (+) 1143 WP_027222211.1 cation diffusion facilitator family transporter -
  AXF35_RS10440 (AXF35_06415) - 2285606..2286364 (+) 759 WP_027222212.1 ZIP family metal transporter -
  AXF35_RS10445 (AXF35_06410) - 2286357..2286959 (+) 603 WP_027222213.1 Maf family protein -

Sequence

Protein


Download         Length: 690 a.a.        Molecular weight: 78240.46 Da        Isoelectric Point: 8.0582

>NTDB_id=144895 AXF35_RS10425 WP_027222209.1 2280392..2282464(+) (recG) [Legionella pneumophila subsp. pascullei strain F-4185]
MLSNSCEYLTGVGPTIAAKLAKCGIFTIQDLLFHLPYKYQDRTRITPIQDLRSNEWCVIAGHVCKTEIKYGKRMMLNCYV
EDKTGIVKLRFFHFNKQQVQSLNNSSIIRAFGEVRDFNNHLEMIHPEYQLLDQESDFHVEETLTPIYPTTQGLTQTRLRQ
LVKIALEQCEHELHQLEWMSEKQLQENNFYDLGEAIKLLHNPPPDISLSTLETGEHPALKRLIFDELLAQQLSMQFAREA
RSKLQSPSIPLDKAIHTRFIESLPFTLTKAQQRVFKEISHDLAQSKPMLRLLQGDVGAGKTIIAALAALQAISQGFQVAF
MAPTDLLSEQHTNNLHKWLEPIGVNVLRLSGKMKTTERNNALASLQDNSCQLIVGTHALFQDKVEFARLGLVIIDEQHRF
GVEQRLLLQQKGQLNQLVPHQLLMTATPIPRTLSMSHFAHLDISVIDQLPPGRMPITTAVLNQDKRELIIERLQAAIANG
KQAYWVCTLIEESEKLQCIAATDTSKKLQEQLPFARVGLVHGRMKTLEKEATMAAFKQGELDLLVATTVIEVGVDVPNAS
LMIIENAERLGLSQLHQLRGRVGRGNNQSHCLLLYQSPLSQQGAERLKIMRSTTDGFLISEKDLELRGSGEILGTRQTGF
RQFKIANLQRDKVLFTILRPIAKQLTLEKPTIARQITQRWLGDFEQFLQS

Nucleotide


Download         Length: 2073 bp        

>NTDB_id=144895 AXF35_RS10425 WP_027222209.1 2280392..2282464(+) (recG) [Legionella pneumophila subsp. pascullei strain F-4185]
GTGCTGAGTAACTCTTGTGAATATTTAACTGGCGTCGGCCCAACCATTGCAGCAAAACTTGCTAAATGCGGGATTTTCAC
CATACAAGACCTGCTTTTCCACTTGCCTTACAAATATCAAGACAGAACCAGGATAACACCAATTCAGGATTTACGCTCCA
ATGAATGGTGTGTTATTGCAGGCCATGTATGCAAAACTGAAATTAAATACGGCAAAAGGATGATGTTGAATTGTTATGTA
GAAGATAAAACAGGCATAGTTAAGCTCCGCTTTTTTCATTTCAACAAGCAGCAAGTTCAGTCTTTGAATAACAGCAGCAT
AATTAGAGCTTTTGGTGAAGTCCGTGACTTCAACAACCATTTGGAAATGATTCACCCTGAGTATCAATTGCTTGACCAGG
AATCAGATTTCCACGTGGAAGAAACGCTTACGCCAATTTATCCAACAACTCAAGGCTTAACTCAAACCCGATTAAGACAG
TTGGTTAAAATAGCCCTGGAACAATGTGAACATGAACTTCATCAATTGGAATGGATGAGTGAAAAGCAATTACAGGAAAA
CAATTTTTATGATCTGGGTGAAGCCATTAAGTTACTGCATAACCCTCCGCCTGACATCTCCCTTTCTACACTGGAAACAG
GCGAACATCCTGCACTCAAGCGGTTAATATTTGATGAGTTGCTGGCACAACAACTCAGCATGCAATTTGCAAGAGAAGCG
CGTAGTAAGCTTCAATCTCCCTCTATACCTCTTGATAAGGCTATCCATACACGCTTTATCGAATCATTACCCTTCACGCT
TACAAAAGCACAACAAAGAGTTTTTAAAGAAATCAGCCATGATTTAGCTCAAAGCAAACCTATGCTTCGCTTGTTACAGG
GTGATGTTGGGGCGGGTAAAACCATTATTGCGGCACTAGCTGCCCTTCAAGCTATCTCACAAGGCTTCCAGGTTGCCTTT
ATGGCACCAACCGATTTATTAAGCGAACAACATACAAATAATCTCCATAAATGGTTAGAACCTATCGGTGTTAATGTATT
AAGACTGAGCGGTAAAATGAAAACCACTGAACGAAACAATGCGCTTGCATCCCTCCAGGACAATAGCTGCCAACTCATTG
TCGGAACCCATGCATTATTTCAGGATAAAGTGGAATTTGCTCGTTTGGGTTTGGTCATTATTGACGAACAGCACCGCTTT
GGAGTAGAACAACGGCTCCTTTTGCAACAAAAAGGGCAATTAAACCAATTAGTCCCTCATCAATTATTAATGACAGCCAC
CCCTATTCCAAGGACCCTGTCAATGTCTCATTTTGCCCATTTGGATATATCGGTGATTGACCAACTACCACCTGGCCGTA
TGCCAATTACAACAGCGGTATTGAACCAGGATAAGCGCGAACTGATTATCGAACGCTTACAAGCAGCTATCGCCAACGGC
AAACAAGCTTACTGGGTATGCACTCTTATAGAAGAGTCTGAAAAATTGCAATGTATAGCAGCAACAGATACCTCAAAAAA
ACTACAGGAACAGCTCCCTTTCGCACGTGTTGGTCTTGTTCATGGGAGGATGAAAACACTCGAAAAAGAGGCTACTATGG
CGGCATTTAAACAAGGCGAGCTTGATTTATTGGTAGCAACTACTGTTATTGAAGTAGGTGTTGATGTTCCTAATGCCAGT
TTAATGATCATTGAAAATGCAGAGAGACTTGGTTTGTCGCAATTACATCAGTTACGAGGACGCGTCGGCAGAGGTAATAA
TCAATCTCACTGTCTTTTACTTTATCAATCCCCCCTATCACAGCAAGGTGCTGAACGTCTAAAAATCATGCGTTCAACAA
CAGACGGTTTTCTAATCTCTGAAAAGGATTTGGAGTTAAGAGGCTCAGGAGAAATACTAGGAACCAGACAAACTGGTTTT
AGGCAATTTAAAATAGCTAACTTACAACGCGATAAAGTCCTCTTCACTATTTTACGACCAATTGCAAAACAACTGACGTT
GGAAAAACCAACAATTGCCAGACAAATTACACAAAGATGGTTAGGCGATTTTGAACAATTTTTGCAAAGTTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(613-672)

Helicase conserved C-terminal domain (Helicase_C)

(469-586)

DEAD/DEAH box helicase (DEAD)

(269-431)

RecG wedge domain (RecG_wedge)

(7-165)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

47.548

97.536

0.464
  recG/mmsA Streptococcus pneumoniae R6

38.647

96.377

0.372
  recG/mmsA Streptococcus pneumoniae R36A

38.647

96.377

0.372
  recG Bacillus subtilis subsp. subtilis str. 168

38.636

95.652

0.37