Detailed information NTG0144889

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AAV29_RS17635
• Genome accession: NZ_CP011346
• Coordinates: 3590159..3591322 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JJ-D34
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3585159..3596322

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAV29_RS17605 (AAV29_17605)	-	3585424..3585843 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
AAV29_RS17610 (AAV29_17610)	comFC	3585917..3586606 (-)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
AAV29_RS17615 (AAV29_17615)	-	3586612..3586896 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
AAV29_RS17620 (AAV29_17620)	comFA	3586954..3588339 (-)	1386	WP_046560106.1	DEAD/DEAH box helicase	Machinery gene
AAV29_RS17625 (AAV29_17625)	-	3588447..3589295 (-)	849	WP_044052857.1	DegV family protein	-
AAV29_RS17630 (AAV29_17630)	degU	3589393..3590082 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AAV29_RS17635 (AAV29_17635)	degS	3590159..3591322 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
AAV29_RS17640 (AAV29_17640)	-	3591544..3592191 (+)	648	WP_046560107.1	YigZ family protein	-
AAV29_RS17645 (AAV29_17645)	-	3592196..3593410 (+)	1215	WP_003151383.1	LCP family protein	-
AAV29_RS17650 (AAV29_17650)	-	3593500..3594576 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AAV29_RS17655 (AAV29_17655)	tuaH	3594709..3595905 (-)	1197	WP_044052856.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=144889 AAV29_RS17635 WP_003151385.1 3590159..3591322(-) (degS) [Bacillus velezensis strain JJ-D34]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=144889 AAV29_RS17635 WP_003151385.1 3590159..3591322(-) (degS) [Bacillus velezensis strain JJ-D34]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGTTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948