Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   AAV29_RS15695 Genome accession   NZ_CP011346
Coordinates   3209225..3210157 (-) Length   310 a.a.
NCBI ID   WP_046560238.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ-D34     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3204225..3215157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAV29_RS15660 (AAV29_15660) - 3204481..3204957 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  AAV29_RS15665 (AAV29_15665) - 3204957..3205241 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  AAV29_RS15670 (AAV29_15670) mnhG 3205225..3205599 (+) 375 WP_046560012.1 monovalent cation/H(+) antiporter subunit G -
  AAV29_RS15675 (AAV29_15675) - 3205639..3206022 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  AAV29_RS15680 (AAV29_15680) comA 3206044..3206688 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  AAV29_RS15685 (AAV29_15685) comP 3206769..3209072 (-) 2304 WP_046560013.1 histidine kinase Regulator
  AAV29_RS15695 (AAV29_15695) comQ 3209225..3210157 (-) 933 WP_046560238.1 class 1 isoprenoid biosynthesis enzyme Regulator
  AAV29_RS15700 (AAV29_15700) degQ 3210342..3210482 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AAV29_RS15710 (AAV29_15710) - 3210948..3211289 (+) 342 WP_046560014.1 hypothetical protein -
  AAV29_RS15715 (AAV29_15715) - 3211296..3212516 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  AAV29_RS15720 (AAV29_15720) - 3212646..3214112 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  AAV29_RS15725 (AAV29_15725) - 3214130..3214681 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 310 a.a.        Molecular weight: 35649.73 Da        Isoelectric Point: 5.2667

>NTDB_id=144882 AAV29_RS15695 WP_046560238.1 3209225..3210157(-) (comQ) [Bacillus velezensis strain JJ-D34]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNNSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=144882 AAV29_RS15695 WP_046560238.1 3209225..3210157(-) (comQ) [Bacillus velezensis strain JJ-D34]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAATTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

93.226

0.571


Multiple sequence alignment