Detailed information    

insolico Bioinformatically predicted

Overview

Name   comO/pilO   Type   Machinery gene
Locus tag   AXE82_RS09605 Genome accession   NZ_CP014234
Coordinates   2177658..2178419 (+) Length   253 a.a.
NCBI ID   WP_062334126.1    Uniprot ID   A0A378QFC7
Organism   Moraxella osloensis strain CCUG 350     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2172658..2183419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE82_RS09590 (AXE82_09595) - 2172971..2175700 (-) 2730 WP_062334116.1 penicillin-binding protein 1A -
  AXE82_RS09595 (AXE82_09600) pilM 2175932..2176984 (+) 1053 WP_062334119.1 pilus assembly protein PilM Machinery gene
  AXE82_RS09600 (AXE82_09605) pilN 2176984..2177655 (+) 672 WP_062334123.1 PilN domain-containing protein Machinery gene
  AXE82_RS09605 (AXE82_09610) comO/pilO 2177658..2178419 (+) 762 WP_062334126.1 type 4a pilus biogenesis protein PilO Machinery gene
  AXE82_RS09610 (AXE82_09615) comL/pilP 2178406..2178939 (+) 534 WP_062334128.1 pilus assembly protein PilP Machinery gene
  AXE82_RS09615 (AXE82_09620) pilQ 2178957..2181329 (+) 2373 WP_062334131.1 type IV pilus secretin family protein Machinery gene
  AXE82_RS09620 (AXE82_09625) - 2181437..2181973 (+) 537 WP_062334134.1 shikimate kinase -
  AXE82_RS09625 (AXE82_09630) aroB 2182042..2183139 (+) 1098 WP_062334137.1 3-dehydroquinate synthase -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 28726.03 Da        Isoelectric Point: 9.6233

>NTDB_id=144837 AXE82_RS09605 WP_062334126.1 2177658..2178419(+) (comO/pilO) [Moraxella osloensis strain CCUG 350]
MKLTNPLKRPRLVKKPVHITAKKSFDVKAFAESFKSLDQNNYGSWPVPVKVTVLLFMVAVIAFLTWFLPISTKREEIAAA
EAEQQTLLDQYRQKESKARHLKEYQAQVLKMQSDFKELLNQLPKDTRISDLVDGINMVGVGSNVKFQDIKVEPEVSQEFF
IEQPIRIAALGDYHQFGSFISGLAKLPRIITLHDFEVANPSPSLDKLPETNLVLNVKTYRSKELTEEELKKAQKDNQKNP
AGSDNKEANNGDK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=144837 AXE82_RS09605 WP_062334126.1 2177658..2178419(+) (comO/pilO) [Moraxella osloensis strain CCUG 350]
GTGAAATTAACCAATCCGCTAAAAAGACCGAGACTTGTCAAAAAACCCGTTCACATTACCGCAAAAAAATCGTTTGATGT
TAAAGCCTTCGCCGAGAGCTTTAAATCCCTAGACCAAAATAATTATGGTAGCTGGCCTGTGCCTGTTAAGGTTACCGTCT
TGCTATTTATGGTCGCTGTTATCGCCTTTTTAACTTGGTTTTTACCGATTAGTACCAAACGTGAGGAGATTGCCGCTGCC
GAAGCCGAGCAGCAAACCTTGCTCGATCAATATCGCCAAAAAGAATCCAAAGCGCGTCATTTAAAAGAATATCAAGCGCA
AGTATTAAAAATGCAGTCTGATTTTAAAGAACTGCTCAATCAATTACCCAAAGACACCCGTATTTCTGACCTAGTAGATG
GGATAAATATGGTTGGTGTGGGCAGTAATGTCAAATTTCAGGATATCAAAGTTGAACCTGAAGTGTCCCAAGAGTTCTTT
ATTGAGCAGCCAATTCGTATTGCCGCTTTAGGAGATTATCACCAATTTGGGTCATTCATTAGTGGTCTTGCTAAATTACC
TCGCATTATTACCCTGCATGACTTTGAAGTTGCCAACCCTAGTCCTAGCCTAGACAAGCTACCAGAAACCAATCTTGTTT
TGAACGTTAAAACTTATCGTTCAAAAGAGTTAACTGAAGAAGAATTGAAAAAGGCACAAAAAGATAATCAAAAAAATCCA
GCTGGGTCTGACAATAAGGAAGCAAATAATGGCGATAAATAA

Domains

Predicted by InterProScan.

Pilus assembly protein, PilO (PilO)

(78-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378QFC7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comO/pilO Acinetobacter baylyi ADP1

45.249

87.352

0.395
  pilO Acinetobacter baumannii D1279779

47.525

79.842

0.379