Detailed information NTG0142287

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: ATE51_RS05625
• Genome accession: NZ_CP013733
• Coordinates: 1112101..1114074 (+)
• Length: 657 a.a.
• NCBI ID: WP_058914647.1
• Uniprot ID: -
• Organism: Campylobacter coli strain OR12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1107101..1119074

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATE51_RS05595 (ATE51_02246)	flgH	1107289..1107987 (+)	699	WP_002787400.1	flagellar basal body L-ring protein FlgH	-
ATE51_RS05600 (ATE51_02248)	ispG	1108071..1109144 (-)	1074	WP_002776443.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
ATE51_RS05605 (ATE51_02250)	-	1109204..1111042 (-)	1839	WP_002787399.1	primosomal protein N'	-
ATE51_RS05610 (ATE51_02252)	Cj0683	1111039..1111485 (-)	447	WP_002776437.1	type II secretion system protein	Machinery gene
ATE51_RS05615 (ATE51_02254)	-	1111482..1111727 (-)	246	WP_002776428.1	hypothetical protein	-
ATE51_RS05620 (ATE51_02256)	-	1111717..1111947 (-)	231	WP_002776426.1	hypothetical protein	-
ATE51_RS05625 (ATE51_02258)	uvrB	1112101..1114074 (+)	1974	WP_058914647.1	excinuclease ABC subunit UvrB	Machinery gene
ATE51_RS05630 (ATE51_02262)	-	1114109..1115532 (-)	1424	Protein_1094	anaerobic C4-dicarboxylate transporter	-
ATE51_RS05635 (ATE51_02264)	-	1115719..1116969 (-)	1251	WP_002776420.1	RNA polymerase factor sigma-54	-
ATE51_RS05640 (ATE51_02266)	lptB	1116969..1117697 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
ATE51_RS05645 (ATE51_02268)	tsaE	1117690..1118097 (-)	408	WP_002776418.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
ATE51_RS05650 (ATE51_02270)	-	1118094..1118339 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 76044.50 Da
• Isoelectric Point: 6.7343

>NTDB_id=142287 ATE51_RS05625 WP_058914647.1 1112101..1114074(+) (uvrB) [Campylobacter coli strain OR12]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYKDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFISATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKIVKELRKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=142287 ATE51_RS05625 WP_058914647.1 1112101..1114074(+) (uvrB) [Campylobacter coli strain OR12]
ATGTTAGAACTTACAAGCGATTTTAAGCCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCGACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATAAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGATATTTATCCTGCTTATTACGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGTGATGAACTGGATGCAATGTATCATTATAATGTTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTT
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGACATTTAACAGGGCTTAAAGAAGGTGATACTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAAATAGGAAATTTCTTGTTATAGTCGATGAAAGCCATGTTTCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGTAGAAAGCAAACTTTAGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTATTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAATTTG
AAAAAATGCCTGCTAATGAAAGAGCTAAAATCGTAAAAGAGCTTCGTAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• UvrB interaction domain (UvrB_inter) (158-246)

• UvrB/uvrC motif (UVR) (623-656)

• Ultra-violet resistance protein B (UvrB) (552-593)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	50.152	99.848	0.501
uvrB	Streptococcus pneumoniae D39	50.152	99.848	0.501
uvrB	Streptococcus pneumoniae TIGR4	50.152	99.848	0.501