Detailed information NTG0142180

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: AVM03_RS08250
• Genome accession: NZ_CP013727
• Coordinates: 1800350..1801354 (-)
• Length: 334 a.a.
• NCBI ID: WP_003152385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain MBE1283
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1795350..1806354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVM03_RS08225 (AVM03_08220)	-	1796313..1796945 (+)	633	WP_003152390.1	GNAT family N-acetyltransferase	-
AVM03_RS08230 (AVM03_08225)	-	1796970..1797614 (+)	645	WP_003152389.1	acetoin utilization AcuB family protein	-
AVM03_RS08235 (AVM03_08230)	-	1797611..1798777 (+)	1167	WP_032857321.1	acetoin utilization protein AcuC	-
AVM03_RS08240 (AVM03_08235)	motS	1798787..1799476 (-)	690	WP_058906287.1	flagellar motor protein MotS	-
AVM03_RS08245 (AVM03_08240)	motP	1799466..1800281 (-)	816	WP_003152386.1	flagellar motor protein MotP	-
AVM03_RS08250 (AVM03_08245)	ccpA	1800350..1801354 (-)	1005	WP_003152385.1	catabolite control protein A	Regulator
AVM03_RS08255 (AVM03_08250)	-	1801634..1802710 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
AVM03_RS08260 (AVM03_08255)	ytxJ	1802946..1803272 (-)	327	WP_003152382.1	bacillithiol system redox-active protein YtxJ	-
AVM03_RS08265 (AVM03_08260)	-	1803298..1803711 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
AVM03_RS08270 (AVM03_08265)	-	1803744..1804166 (-)	423	WP_007408777.1	DUF948 domain-containing protein	-
AVM03_RS08275 (AVM03_08270)	murC	1804322..1805620 (-)	1299	WP_003152377.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36963.29 Da
• Isoelectric Point: 4.9206

>NTDB_id=142180 AVM03_RS08250 WP_003152385.1 1800350..1801354(-) (ccpA) [Bacillus amyloliquefaciens strain MBE1283]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=142180 AVM03_RS08250 WP_003152385.1 1800350..1801354(-) (ccpA) [Bacillus amyloliquefaciens strain MBE1283]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACAACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCGGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATCTTAAGCAACTCGGATCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCTGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATTGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACTTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503