Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N805_RS24355 Genome accession   NZ_CP010979
Coordinates   5514514..5514915 (+) Length   133 a.a.
NCBI ID   WP_016501972.1    Uniprot ID   A0AAU8S4N7
Organism   Pseudomonas putida S13.1.2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5509514..5519915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N805_RS24325 (N805_24330) pyrR 5510080..5510598 (-) 519 WP_019471562.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  N805_RS24330 (N805_24335) ruvX 5510648..5511073 (-) 426 WP_016489546.1 Holliday junction resolvase RuvX -
  N805_RS24335 (N805_24340) - 5511073..5511642 (-) 570 WP_019471561.1 YqgE/AlgH family protein -
  N805_RS24340 (N805_24345) - 5511786..5512178 (-) 393 WP_019471560.1 hypothetical protein -
  N805_RS24345 (N805_24350) - 5512409..5513314 (-) 906 WP_019471559.1 energy transducer TonB -
  N805_RS24350 (N805_24355) gshB 5513406..5514359 (-) 954 WP_019471558.1 glutathione synthase -
  N805_RS24355 (N805_24360) pilG 5514514..5514915 (+) 402 WP_016501972.1 response regulator Regulator
  N805_RS24360 (N805_24365) pilH 5514963..5515328 (+) 366 WP_019471557.1 twitching motility response regulator PilH -
  N805_RS24365 (N805_24370) - 5515325..5515879 (+) 555 WP_019471556.1 chemotaxis protein CheW -
  N805_RS24370 (N805_24375) - 5515927..5517951 (+) 2025 WP_230685740.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14601.87 Da        Isoelectric Point: 6.4772

>NTDB_id=141085 N805_RS24355 WP_016501972.1 5514514..5514915(+) (pilG) [Pseudomonas putida S13.1.2]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFTAPPQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=141085 N805_RS24355 WP_016501972.1 5514514..5514915(+) (pilG) [Pseudomonas putida S13.1.2]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCCCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGTGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTTG
TCGATGTGCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCGTGATCAAGCACAACAGTGCTTTCAAGGACACCCCG
GTGATCCTGCTGTCGTCGCGCGACGGGCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCTGATCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAGCTGCTCGACGCGATCCGCGCCCACGTGCCCGGGTTTACCGCGCCTCCACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment