Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   RDF_RS03910 Genome accession   NZ_CP010867
Coordinates   734639..735643 (+) Length   334 a.a.
NCBI ID   WP_001090621.1    Uniprot ID   A0A0E1EL27
Organism   Streptococcus agalactiae strain SS1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 729639..740643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDF_RS03890 (RDF_0715) - 729676..730515 (+) 840 WP_000034790.1 SDR family oxidoreductase -
  RDF_RS03895 (RDF_0716) - 730668..731480 (+) 813 WP_000228641.1 HAD family hydrolase -
  RDF_RS03900 (RDF_0717) - 731496..733286 (+) 1791 WP_000149451.1 glycoside hydrolase family 3 protein -
  RDF_RS03905 (RDF_0718) - 733344..734429 (-) 1086 WP_000040811.1 M24 family metallopeptidase -
  RDF_RS03910 (RDF_0719) ccpA 734639..735643 (+) 1005 WP_001090621.1 catabolite control protein A Regulator
  RDF_RS03915 (RDF_0720) - 735775..737241 (+) 1467 WP_000180582.1 alpha-amylase -
  RDF_RS03920 (RDF_0721) - 737286..738284 (+) 999 WP_000866345.1 glycosyltransferase family 4 protein -
  RDF_RS03925 (RDF_0722) - 738286..739620 (+) 1335 WP_001219475.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36617.69 Da        Isoelectric Point: 5.7185

>NTDB_id=140389 RDF_RS03910 WP_001090621.1 734639..735643(+) (ccpA) [Streptococcus agalactiae strain SS1]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAAVDVIDILAGNHKDIAFVSGPLIDDINGKVRLAGYKEGLKKNGLNFKEGLVFEANYRYAEGFALAQRVINAG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPIAQYTRPNLTSISQPVYDLGAVSMRMLTKIMHKEELEEKEI
VLNHGIVKRGTTNN

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=140389 RDF_RS03910 WP_001090621.1 734639..735643(+) (ccpA) [Streptococcus agalactiae strain SS1]
ATGAATACAGATGATACGATTACGATTTATGATGTTGCCCGTGAAGCAGGTGTTTCGATGGCAACTGTTAGTCGTGTGGT
AAATGGAAATAAAAATGTCAAGGAAAATACACGTAAGAAAGTCCTTGAAGTTATTGATCGTCTTGACTATCGTCCAAATG
CTGTGGCGCGTGGTTTAGCAAGTAAAAAAACGACAACTGTTGGTGTTGTCATTCCTAATATCGCAAATAGCTACTTTTCA
ATTTTAGCGCGTGGTATTGATGATATTGCAGCAATGTACAAATATAACATTGTCCTTGCTTCAAGTGATGAAGACGATGA
TAAAGAGGTTAATGTTGTTAATACTTTGTTTGCTAAGCAAGTAGACGGTATTATTTTTATGGGACACCACTTAACTGAAA
AGATTCGTGCAGAGTTCTCTCGTTCACGCACACCGATTGTTTTAGCAGGTACTGTGGACCTTGAGCATCAATTACCAAGT
GTTAATATCGATTACAAAGCAGCAGCAGTTGATGTTATTGATATTTTAGCTGGCAATCATAAAGACATTGCTTTTGTATC
AGGACCACTTATTGACGATATTAATGGCAAGGTTCGTTTGGCAGGATACAAAGAAGGTCTCAAGAAAAATGGCTTAAACT
TTAAAGAGGGGTTGGTTTTTGAAGCCAACTACCGTTATGCTGAAGGCTTTGCATTAGCTCAACGCGTGATTAATGCTGGA
GCAACAGCAGCATATGTTGCTGAGGATGAGTTAGCGGCAGGTTTGTTAAATGGTCTTTTTGAGGCAGGTAAACGTGTCCC
TGAAGATTTTGAAATTATCACAAGCAATGACTCGCCAATCGCACAATATACACGTCCTAACTTAACTTCTATCAGTCAAC
CGGTTTATGATTTGGGTGCTGTTAGCATGCGTATGCTAACAAAAATTATGCACAAAGAAGAGTTGGAAGAAAAAGAAATA
GTGCTTAATCACGGGATTGTTAAACGTGGCACAACAAATAATTAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(179-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E1EL27

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.916

99.401

0.784
  ccpA Streptococcus pneumoniae D39

77.108

99.401

0.766
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment