Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | RDF_RS02240 | Genome accession | NZ_CP010867 |
| Coordinates | 392218..393252 (+) | Length | 344 a.a. |
| NCBI ID | WP_000732713.1 | Uniprot ID | A0AAV3JGP6 |
| Organism | Streptococcus agalactiae strain SS1 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 387218..398252
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RDF_RS02200 (RDF_0369) | tsaE | 387294..387737 (+) | 444 | WP_000500161.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| RDF_RS02205 (RDF_0370) | - | 387730..388251 (+) | 522 | WP_000043146.1 | GNAT family N-acetyltransferase | - |
| RDF_RS02210 (RDF_0371) | brpA | 388260..389567 (+) | 1308 | WP_000708156.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| RDF_RS02215 (RDF_0372) | - | 389631..389927 (-) | 297 | WP_000690175.1 | hypothetical protein | - |
| RDF_RS02220 (RDF_0373) | - | 389924..390343 (-) | 420 | WP_000368097.1 | HIT family protein | - |
| RDF_RS02225 (RDF_0374) | - | 390679..391182 (+) | 504 | WP_000773453.1 | hypothetical protein | - |
| RDF_RS02230 (RDF_0375) | - | 391234..391419 (-) | 186 | WP_000368100.1 | hypothetical protein | - |
| RDF_RS02235 (RDF_0376) | pptA | 391491..392216 (+) | 726 | WP_000912307.1 | ABC transporter ATP-binding protein | Regulator |
| RDF_RS02240 (RDF_0377) | pptB | 392218..393252 (+) | 1035 | WP_000732713.1 | ABC transporter permease | Regulator |
| RDF_RS02245 (RDF_0378) | ccrZ | 393310..394110 (+) | 801 | WP_000155919.1 | cell cycle regulator CcrZ | - |
| RDF_RS02250 (RDF_0379) | trmB | 394100..394735 (+) | 636 | WP_001266024.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| RDF_RS02260 (RDF_0380) | rimP | 395225..395701 (+) | 477 | WP_041971671.1 | ribosome maturation factor RimP | - |
| RDF_RS02265 (RDF_0381) | nusA | 395737..396888 (+) | 1152 | WP_000032295.1 | transcription termination factor NusA | - |
| RDF_RS02270 (RDF_0382) | rnpM | 396910..397206 (+) | 297 | WP_001140526.1 | RNase P modulator RnpM | - |
| RDF_RS02275 (RDF_0383) | - | 397199..397501 (+) | 303 | WP_001065560.1 | YlxQ-related RNA-binding protein | - |
| RDF_RS11525 | - | 397521..397673 (+) | 153 | Protein_377 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 40206.54 Da Isoelectric Point: 10.4988
>NTDB_id=140385 RDF_RS02240 WP_000732713.1 392218..393252(+) (pptB) [Streptococcus agalactiae strain SS1]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID
Nucleotide
Download Length: 1035 bp
>NTDB_id=140385 RDF_RS02240 WP_000732713.1 392218..393252(+) (pptB) [Streptococcus agalactiae strain SS1]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus thermophilus LMD-9 |
48.547 |
100 |
0.485 |
| pptB | Streptococcus salivarius strain HSISS4 |
48.256 |
100 |
0.483 |