Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | TO73_RS11490 | Genome accession | NZ_CP010822 |
| Coordinates | 2152509..2152817 (+) | Length | 102 a.a. |
| NCBI ID | WP_003049113.1 | Uniprot ID | - |
| Organism | Thermus aquaticus Y51MC23 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2147509..2157817
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TO73_RS11455 (TO73_2380) | - | 2148000..2148461 (+) | 462 | WP_003049125.1 | hypothetical protein | - |
| TO73_RS11460 (TO73_2381) | pfkA | 2148438..2149406 (-) | 969 | WP_003049123.1 | 6-phosphofructokinase | - |
| TO73_RS11465 (TO73_2382) | rsmI | 2149403..2150191 (-) | 789 | WP_003049122.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| TO73_RS11470 (TO73_2383) | - | 2150196..2150594 (-) | 399 | WP_003049120.1 | hypothetical protein | - |
| TO73_RS11475 (TO73_2384) | - | 2150731..2151258 (-) | 528 | WP_003049118.1 | inorganic diphosphatase | - |
| TO73_RS11480 (TO73_2385) | - | 2151269..2151898 (-) | 630 | WP_003049117.1 | glycerophosphodiester phosphodiesterase | - |
| TO73_RS11485 (TO73_2386) | - | 2151922..2152536 (+) | 615 | WP_003049115.1 | YcxB family protein | - |
| TO73_RS11490 (TO73_2387) | comEA | 2152509..2152817 (+) | 309 | WP_003049113.1 | ComEA family DNA-binding protein | Machinery gene |
| TO73_RS11495 (TO73_2388) | comA/comEC | 2152814..2154844 (+) | 2031 | WP_040684643.1 | ComEC/Rec2 family competence protein | Machinery gene |
| TO73_RS11500 (TO73_2389) | - | 2154832..2155638 (-) | 807 | WP_003049110.1 | ParB/RepB/Spo0J family partition protein | - |
| TO73_RS11505 (TO73_2390) | soj | 2155622..2156371 (-) | 750 | WP_003049107.1 | chromosome-partitioning ATPase Soj | - |
| TO73_RS11510 (TO73_2391) | rsmG | 2156365..2157093 (-) | 729 | WP_003049106.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10987.02 Da Isoelectric Point: 8.5051
>NTDB_id=140111 TO73_RS11490 WP_003049113.1 2152509..2152817(+) (comEA) [Thermus aquaticus Y51MC23]
MVLGYLLAVALLALLSLWPKLAPRPLPVRVEALSEASFTPPAPEPVSLNGASLEELEALPGIGPTLAQRIVEGRPYGTVE
DLLKVKGIGPRTLERIRPYVRP
MVLGYLLAVALLALLSLWPKLAPRPLPVRVEALSEASFTPPAPEPVSLNGASLEELEALPGIGPTLAQRIVEGRPYGTVE
DLLKVKGIGPRTLERIRPYVRP
Nucleotide
Download Length: 309 bp
>NTDB_id=140111 TO73_RS11490 WP_003049113.1 2152509..2152817(+) (comEA) [Thermus aquaticus Y51MC23]
GTGGTCCTTGGCTACCTCCTGGCGGTAGCCCTTCTGGCCCTCCTCAGCCTTTGGCCCAAGCTGGCCCCCAGGCCTCTCCC
CGTCCGGGTGGAGGCCCTGTCCGAAGCCTCCTTCACCCCTCCCGCCCCGGAGCCCGTGAGCCTGAACGGAGCGAGCCTGG
AGGAGCTGGAGGCCCTTCCCGGGATAGGCCCCACCCTGGCCCAAAGGATCGTGGAGGGGAGGCCCTACGGAACCGTGGAG
GACCTCCTCAAGGTGAAGGGCATTGGGCCCCGCACCCTGGAAAGGATCCGCCCTTACGTGAGGCCGTGA
GTGGTCCTTGGCTACCTCCTGGCGGTAGCCCTTCTGGCCCTCCTCAGCCTTTGGCCCAAGCTGGCCCCCAGGCCTCTCCC
CGTCCGGGTGGAGGCCCTGTCCGAAGCCTCCTTCACCCCTCCCGCCCCGGAGCCCGTGAGCCTGAACGGAGCGAGCCTGG
AGGAGCTGGAGGCCCTTCCCGGGATAGGCCCCACCCTGGCCCAAAGGATCGTGGAGGGGAGGCCCTACGGAACCGTGGAG
GACCTCCTCAAGGTGAAGGGCATTGGGCCCCGCACCCTGGAAAGGATCCGCCCTTACGTGAGGCCGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
79.412 |
100 |
0.794 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
41.667 |
100 |
0.441 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
34.545 |
100 |
0.373 |