Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   ASU36_RS08715 Genome accession   NZ_CP013137
Coordinates   1689592..1690062 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain XQ     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1684592..1695062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU36_RS08695 (ASU36_08695) coaW 1684902..1685705 (+) 804 WP_058008183.1 type II pantothenate kinase -
  ASU36_RS08700 (ASU36_08700) - 1685835..1686506 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  ASU36_RS08705 (ASU36_08705) ldmS 1686905..1688098 (-) 1194 WP_000183713.1 L-aspartate--L-methionine ligase LdmS -
  ASU36_RS08710 (ASU36_08710) - 1688098..1689282 (-) 1185 WP_001291488.1 M20 family metallopeptidase -
  ASU36_RS08715 (ASU36_08715) luxS 1689592..1690062 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  ASU36_RS08720 (ASU36_08720) - 1690215..1690565 (-) 351 WP_001024034.1 membrane protein -
  ASU36_RS08725 (ASU36_08725) - 1690579..1691880 (-) 1302 WP_001242306.1 pyrimidine-nucleoside phosphorylase -
  ASU36_RS08735 (ASU36_08735) deoC 1692161..1692823 (-) 663 WP_001083326.1 deoxyribose-phosphate aldolase -
  ASU36_RS08740 (ASU36_08740) deoD 1693137..1693847 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  ASU36_RS08745 (ASU36_08745) - 1693968..1694411 (-) 444 WP_000070865.1 Dps family protein -
  ASU36_RS08750 (ASU36_08750) - 1694611..1695024 (-) 414 WP_001123308.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=139075 ASU36_RS08715 WP_000164421.1 1689592..1690062(+) (luxS) [Staphylococcus aureus strain XQ]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=139075 ASU36_RS08715 WP_000164421.1 1689592..1690062(+) (luxS) [Staphylococcus aureus strain XQ]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATATGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment