Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | RU53_RS08460 | Genome accession | NZ_CP010526 |
| Coordinates | 1694850..1695824 (-) | Length | 324 a.a. |
| NCBI ID | WP_000697227.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1689850..1700824
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RU53_RS08420 (RU53_1636) | gcvT | 1690351..1691442 (-) | 1092 | WP_000093346.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RU53_RS08425 (RU53_1638) | - | 1691601..1692125 (-) | 525 | WP_001015121.1 | shikimate kinase | - |
| RU53_RS15325 | - | 1692115..1692261 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RU53_RS08435 (RU53_1639) | comGF | 1692358..1692855 (-) | 498 | WP_001829055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RU53_RS08440 (RU53_1640) | comGE | 1692773..1693072 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RU53_RS08445 (RU53_1641) | comGD | 1693059..1693505 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RU53_RS08450 (RU53_1642) | comGC | 1693483..1693794 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RU53_RS08455 (RU53_1643) | comGB | 1693808..1694878 (-) | 1071 | WP_000776406.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RU53_RS08460 (RU53_1644) | comGA | 1694850..1695824 (-) | 975 | WP_000697227.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RU53_RS08465 (RU53_1645) | - | 1695876..1696499 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RU53_RS08470 (RU53_1646) | - | 1696496..1696825 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RU53_RS08475 (RU53_1647) | - | 1696825..1697811 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RU53_RS08480 | - | 1697808..1698011 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RU53_RS08485 (RU53_1648) | - | 1697992..1699455 (-) | 1464 | WP_001017867.1 | rhomboid family protein | - |
| RU53_RS08490 (RU53_1649) | - | 1699467..1700006 (-) | 540 | WP_000164546.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| RU53_RS08495 (RU53_1650) | rpmG | 1700215..1700364 (-) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36842.96 Da Isoelectric Point: 8.8508
>NTDB_id=139080 RU53_RS08460 WP_000697227.1 1694850..1695824(-) (comGA) [Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYLF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYLF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=139080 RU53_RS08460 WP_000697227.1 1694850..1695824(-) (comGA) [Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCTTTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACCACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGACCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATAAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCTTTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACCACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGACCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATAAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.383 |
100 |
0.994 |
| comGA | Staphylococcus aureus N315 |
99.383 |
100 |
0.994 |