Detailed information NTG0138807

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: RC08_RS05030
• Genome accession: NZ_CP010510
• Coordinates: 953232..953963 (+)
• Length: 243 a.a.
• NCBI ID: WP_002932769.1
• Uniprot ID: A0A5T0Q210
• Organism: Campylobacter jejuni strain CJ677CC040
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 948232..958963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RC08_RS05000 (RC08_04995)	rpsF	948374..948751 (+)	378	WP_002812868.1	30S ribosomal protein S6	-
RC08_RS05005 (RC08_05000)	ssb	948760..949311 (+)	552	WP_002932771.1	single-stranded DNA-binding protein	-
RC08_RS05010 (RC08_05005)	rpsR	949322..949582 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
RC08_RS05015 (RC08_05010)	lon	949643..952018 (-)	2376	WP_002866098.1	endopeptidase La	-
RC08_RS05020 (RC08_05015)	-	952035..952682 (-)	648	WP_002877748.1	outer membrane protein assembly factor BamD	-
RC08_RS05025 (RC08_05020)	fliW	952843..953232 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
RC08_RS05030 (RC08_05025)	proC	953232..953963 (+)	732	WP_002932769.1	pyrroline-5-carboxylate reductase	Machinery gene
RC08_RS05035 (RC08_05030)	ctsT	953960..954262 (+)	303	WP_002932767.1	transformation system protein	Machinery gene
RC08_RS05040 (RC08_05035)	-	954259..954921 (+)	663	WP_002866103.1	hypothetical protein	-
RC08_RS05045 (RC08_05040)	-	954918..955370 (+)	453	WP_002869049.1	hypothetical protein	-
RC08_RS05050 (RC08_05045)	hemD	955367..955996 (-)	630	WP_002932761.1	uroporphyrinogen-III synthase	-
RC08_RS05055 (RC08_05050)	thiE	955974..956606 (-)	633	WP_002932757.1	thiamine phosphate synthase	-
RC08_RS05060 (RC08_05055)	thiD	956596..957408 (-)	813	WP_002869047.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
RC08_RS05065 (RC08_05060)	-	957405..958091 (-)	687	WP_002932755.1	3-methyladenine DNA glycosylase	-
RC08_RS05070 (RC08_05065)	-	958088..958849 (-)	762	WP_002932753.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26602.04 Da
• Isoelectric Point: 8.9105

>NTDB_id=138807 RC08_RS05030 WP_002932769.1 953232..953963(+) (proC) [Campylobacter jejuni strain CJ677CC040]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQILKGRARIL
ISVLANVDFEKLQTIKAQNYVRIMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=138807 RC08_RS05030 WP_002932769.1 953232..953963(+) (proC) [Campylobacter jejuni strain CJ677CC040]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCACCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTGGCTTTCAAACCTTATGCTTTAGAAAATATTGCCCAAATACTAAAAGGACGAGCACGCATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATGCCTAATAC
AGCAGCTAAATATAAGGCTTCAACTACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGTTCAGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGTATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

3D structure

• AlphaFold DB: A0A5T0Q210

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	98.354	100	0.984