Detailed information NTG0138599

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: AR446_RS04880
• Genome accession: NZ_CP013034
• Coordinates: 951981..953954 (+)
• Length: 657 a.a.
• NCBI ID: WP_002776424.1
• Uniprot ID: A0ABN0ERK2
• Organism: Campylobacter coli strain HC2-48
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 946981..958954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AR446_RS04850 (AR446_04850)	-	947725..948333 (+)	609	WP_002781606.1	gamma-glutamyl-CDP-amidate hydrolase	-
AR446_RS04855 (AR446_04855)	-	948330..949100 (+)	771	WP_002781608.1	sugar phosphate nucleotidyltransferase	-
AR446_RS04860 (AR446_04860)	-	949084..950922 (-)	1839	WP_002804655.1	primosomal protein N'	-
AR446_RS04865 (AR446_04865)	Cj0683	950919..951365 (-)	447	WP_002799883.1	type II secretion system protein	Machinery gene
AR446_RS04870 (AR446_04870)	-	951362..951607 (-)	246	WP_002776428.1	hypothetical protein	-
AR446_RS04875 (AR446_04875)	-	951597..951827 (-)	231	WP_002776426.1	hypothetical protein	-
AR446_RS04880 (AR446_04880)	uvrB	951981..953954 (+)	1974	WP_002776424.1	excinuclease ABC subunit UvrB	Machinery gene
AR446_RS04885 (AR446_04885)	-	953989..955413 (-)	1425	WP_002776421.1	anaerobic C4-dicarboxylate transporter	-
AR446_RS04890 (AR446_04890)	-	955600..956850 (-)	1251	WP_002781614.1	RNA polymerase factor sigma-54	-
AR446_RS04895 (AR446_04895)	lptB	956850..957578 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
AR446_RS04900 (AR446_04900)	tsaE	957571..957978 (-)	408	WP_002776418.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
AR446_RS04905 (AR446_04905)	-	957975..958220 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 76045.44 Da
• Isoelectric Point: 6.4586

>NTDB_id=138599 AR446_RS04880 WP_002776424.1 951981..953954(+) (uvrB) [Campylobacter coli strain HC2-48]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFISATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKIVKELRKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=138599 AR446_RS04880 WP_002776424.1 951981..953954(+) (uvrB) [Campylobacter coli strain HC2-48]
ATGTTAGAACTTACAAGCGATTTTAAACCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCAACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATGAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGATATTTATCCTGCTTATTACGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGTGATGAACTGGATGCAATGTATCATTATAATGTTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTT
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGACATTTAACAGGGCTTAAAGAAGGTGATACTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAAATAGGAAATTTCTTGTTATAGTCGATGAAAGCCATGTTTCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGTAGAAAGCAAACTTTAGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTATTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAATTTG
AAAAAATGCCTGCTAATGAAAGAGCTAAAATCGTAAAAGAGCTTCGTAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (8-116)

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• UvrB interaction domain (UvrB_inter) (158-246)

• UvrB/uvrC motif (UVR) (623-656)

• Ultra-violet resistance protein B (UvrB) (552-593)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	50.152	99.848	0.501
uvrB	Streptococcus pneumoniae D39	50.152	99.848	0.501
uvrB	Streptococcus pneumoniae TIGR4	50.152	99.848	0.501