Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RB99_RS05480 | Genome accession | NZ_CP010502 |
| Coordinates | 1019781..1020083 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC014 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1014781..1025083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RB99_RS05455 (RB99_05460) | rpsR | 1015143..1015403 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RB99_RS05460 (RB99_05465) | lon | 1015464..1017839 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RB99_RS05465 (RB99_05470) | - | 1017856..1018503 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RB99_RS05470 (RB99_05475) | fliW | 1018664..1019053 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RB99_RS05475 (RB99_05480) | proC | 1019053..1019784 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RB99_RS05480 (RB99_05485) | ctsT | 1019781..1020083 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RB99_RS05485 (RB99_05490) | - | 1020080..1020742 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RB99_RS05490 (RB99_05495) | - | 1020739..1021191 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RB99_RS05495 (RB99_05500) | hemD | 1021188..1021817 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RB99_RS05500 (RB99_05505) | thiE | 1021795..1022427 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RB99_RS05505 (RB99_05510) | thiD | 1022417..1023229 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RB99_RS05510 (RB99_05515) | - | 1023226..1023912 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RB99_RS05515 (RB99_05520) | - | 1023909..1024670 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138599 RB99_RS05480 WP_002932767.1 1019781..1020083(+) (ctsT) [Campylobacter jejuni strain CJ677CC014]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138599 RB99_RS05480 WP_002932767.1 1019781..1020083(+) (ctsT) [Campylobacter jejuni strain CJ677CC014]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |