Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QY02_RS05470 | Genome accession | NZ_CP010472 |
| Coordinates | 1019059..1019361 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC002 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1014059..1024361
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QY02_RS05445 (QY02_05440) | rpsR | 1014421..1014681 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| QY02_RS05450 (QY02_05445) | lon | 1014742..1017117 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| QY02_RS05455 (QY02_05450) | - | 1017134..1017781 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| QY02_RS05460 (QY02_05455) | fliW | 1017942..1018331 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QY02_RS05465 (QY02_05460) | proC | 1018331..1019062 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QY02_RS05470 (QY02_05465) | ctsT | 1019059..1019361 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| QY02_RS05475 (QY02_05470) | - | 1019358..1020020 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| QY02_RS05480 (QY02_05475) | - | 1020017..1020469 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| QY02_RS05485 (QY02_05480) | hemD | 1020466..1021095 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| QY02_RS05490 (QY02_05485) | thiE | 1021073..1021705 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| QY02_RS05495 (QY02_05490) | thiD | 1021695..1022507 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QY02_RS05500 (QY02_05495) | - | 1022504..1023190 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| QY02_RS05505 (QY02_05500) | - | 1023187..1023948 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137833 QY02_RS05470 WP_002932767.1 1019059..1019361(+) (ctsT) [Campylobacter jejuni strain CJ677CC002]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137833 QY02_RS05470 WP_002932767.1 1019059..1019361(+) (ctsT) [Campylobacter jejuni strain CJ677CC002]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |