Detailed information NTG0136989

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: Achr_RS14160
• Genome accession: NZ_CP010415
• Coordinates: 3161206..3163416 (-)
• Length: 736 a.a.
• NCBI ID: WP_082045471.1
• Uniprot ID: -
• Organism: Azotobacter chroococcum NCIMB 8003
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3156206..3168416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Achr_RS14125 (Achr_28040)	murB	3156588..3157607 (-)	1020	WP_039805414.1	UDP-N-acetylmuramate dehydrogenase	-
Achr_RS14130 (Achr_28050)	-	3157604..3158068 (-)	465	WP_039805415.1	low molecular weight protein-tyrosine-phosphatase	-
Achr_RS14135 (Achr_28060)	kdsB	3158068..3158832 (-)	765	WP_039805417.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Achr_RS14140 (Achr_28070)	-	3158829..3159014 (-)	186	WP_039805419.1	Trm112 family protein	-
Achr_RS14145 (Achr_28080)	lpxK	3159075..3160076 (-)	1002	WP_039805421.1	tetraacyldisaccharide 4'-kinase	-
Achr_RS14150 (Achr_28090)	-	3160076..3160504 (-)	429	WP_039805424.1	ExbD/TolR family protein	-
Achr_RS14155 (Achr_28100)	-	3160501..3161133 (-)	633	WP_039805427.1	MotA/TolQ/ExbB proton channel family protein	-
Achr_RS14160 (Achr_28110)	comA	3161206..3163416 (-)	2211	WP_082045471.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
Achr_RS14165 (Achr_28120)	-	3163557..3164084 (+)	528	WP_039805429.1	DUF2062 domain-containing protein	-
Achr_RS14170 (Achr_28130)	-	3164111..3165355 (-)	1245	WP_039805431.1	lipoprotein-releasing ABC transporter permease subunit	-
Achr_RS14175 (Achr_28140)	lolD	3165358..3166041 (-)	684	WP_420808889.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
Achr_RS14180 (Achr_28150)	-	3166049..3167299 (-)	1251	WP_039805435.1	lipoprotein-releasing ABC transporter permease subunit	-
Achr_RS14185 (Achr_28160)	-	3167609..3168331 (+)	723	WP_039805437.1	glycerophosphodiester phosphodiesterase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79674.56 Da
• Isoelectric Point: 10.1787

>NTDB_id=136989 Achr_RS14160 WP_082045471.1 3161206..3163416(-) (comA) [Azotobacter chroococcum NCIMB 8003]
MLALAAGLLVLRFLPALPPWWLWSLLLLGGGGCLALRRYRPALFLLGLGWACLSAHWALEGRLPAELDGRTLWLEGQVVG
LPERVDGTLRFQVEGALSRRAELPRRLRLAWHAGPEVRAGERWRLAVALKRPRGLVNPQGFDAEAWLLARRIGATGTVKA
GERLGSPDTADGWRDGLRQRLQQVDAHGRAGAIAALVMGDASGLSAADWHLLQDTGTVHLMVISGQHVALLAGLVYGLVA
LLARHGLWPRRLPWLPWACALALVAALGYGWLAGFGVPVQRACVMVAVVLLWRLRFRHLGFWLPLLLALVGVLLLEPLAS
LQPGFWLSFCAVAILALAFGGRLGAWSWRQTLWRAQWTSALGLLPLLLVLGLPISLSGPLANLIAVPWVSLAVVPLALLG
TLLLPLPVLGEGLLWMAGALLAALFWLLGEIAGAVPAWLPHDVPFWAWLLATLGTVLILLPAGVPLRALGLALLLPLAFP
LGVRIPPGRADVWVLDVGQGLAVLLRTRGHVLLYDAGPRFGDFDLGERVVLPSLRALGISRLDALLLSHADGDHAGGALA
VQRGLAPGEVVAGEVQALPAMLAAQPCTSRDWHWDDVRFATWQWASARDGNQASCVLLVEAGGERLLLTGDIDAAAERAL
LDSHPEWRADWLLAPHHGSRSSSSRALLEALAPRAVLISRSWNNAFGHPHPEAVARYRNLPAALYDTARQGALQFRLGDW
GRAQGLREEPRFWREK

Nucleotide

• Length: 2211 bp

>NTDB_id=136989 Achr_RS14160 WP_082045471.1 3161206..3163416(-) (comA) [Azotobacter chroococcum NCIMB 8003]
ATGTTGGCGCTCGCGGCAGGCCTGCTCGTCCTGCGTTTTCTCCCGGCCCTGCCGCCCTGGTGGCTGTGGTCGCTGTTGCT
GCTGGGCGGGGGCGGCTGCCTGGCGTTGCGTCGCTATCGGCCGGCGCTGTTTCTGCTCGGCCTGGGCTGGGCCTGCCTGT
CGGCGCACTGGGCACTGGAGGGGCGCCTGCCCGCCGAGCTCGACGGTCGTACCCTGTGGCTGGAAGGGCAGGTGGTCGGC
CTGCCGGAGCGGGTCGACGGCACGTTGCGCTTCCAGGTGGAGGGCGCACTGTCCCGGCGTGCCGAATTGCCCCGGCGCCT
GCGCCTGGCCTGGCATGCCGGGCCGGAAGTCCGCGCCGGCGAGCGCTGGCGCCTGGCGGTTGCCCTCAAGCGTCCGCGTG
GCCTGGTCAATCCGCAGGGGTTCGATGCCGAGGCCTGGCTGCTGGCCCGGCGCATCGGTGCCACTGGTACGGTGAAGGCC
GGGGAGCGTCTTGGATCACCAGACACGGCCGACGGCTGGCGCGACGGCCTGCGGCAGCGCCTGCAGCAGGTCGATGCCCA
TGGCCGTGCAGGCGCGATTGCCGCACTGGTGATGGGCGATGCCTCGGGGCTGAGCGCGGCGGACTGGCACCTTCTGCAGG
ACACCGGCACCGTGCATCTGATGGTGATCTCCGGTCAGCATGTCGCCCTGCTCGCCGGCCTGGTCTACGGACTGGTCGCC
CTGCTGGCGCGTCACGGTCTGTGGCCGCGGCGCCTGCCCTGGCTGCCCTGGGCGTGTGCGCTGGCCCTGGTCGCGGCCTT
GGGCTACGGCTGGCTGGCCGGTTTCGGGGTGCCGGTGCAGCGGGCCTGCGTCATGGTCGCCGTGGTACTGCTCTGGCGCC
TGCGCTTTCGCCACCTGGGATTCTGGCTGCCCCTGCTGCTGGCGCTGGTCGGGGTGTTGCTGCTCGAGCCGCTGGCCAGC
CTGCAGCCGGGGTTCTGGCTGTCGTTCTGCGCGGTGGCGATTCTCGCCCTGGCCTTTGGCGGTCGGCTGGGCGCTTGGTC
GTGGCGACAGACCCTGTGGCGGGCCCAGTGGACCAGCGCGCTGGGGCTGTTGCCGCTGCTGCTGGTCCTGGGATTGCCGA
TCAGTCTCAGCGGCCCGCTGGCCAATCTGATCGCGGTGCCATGGGTCAGTCTTGCGGTGGTGCCGCTGGCGCTGCTCGGA
ACCCTGTTGCTGCCCTTGCCGGTGCTGGGCGAGGGCCTGCTCTGGATGGCCGGCGCCTTGCTGGCAGCGCTGTTCTGGCT
GCTCGGCGAGATCGCCGGCGCCGTGCCGGCCTGGCTGCCCCATGATGTGCCGTTCTGGGCCTGGCTGCTGGCGACGCTCG
GGACAGTGCTGATCCTGCTGCCGGCCGGGGTGCCGCTGCGTGCCCTGGGGCTGGCGCTGCTGCTGCCCCTGGCATTTCCA
CTCGGGGTGCGGATTCCGCCTGGCCGGGCCGATGTCTGGGTGCTGGATGTCGGTCAGGGGCTCGCCGTGCTCCTGCGCAC
CCGCGGGCATGTTCTGCTCTATGACGCGGGGCCGCGCTTCGGCGATTTCGATCTGGGCGAGCGGGTGGTCCTGCCTTCGC
TGCGCGCTCTGGGTATCTCCCGTCTGGATGCGCTGCTGCTCAGTCATGCCGACGGCGATCACGCCGGCGGTGCCTTGGCC
GTGCAGCGCGGCCTGGCACCGGGCGAGGTCGTCGCCGGCGAGGTGCAGGCGCTGCCGGCAATGCTCGCCGCCCAGCCCTG
TACCAGTCGGGACTGGCACTGGGACGACGTGCGCTTCGCCACCTGGCAGTGGGCCTCGGCGCGGGACGGCAACCAGGCGT
CCTGCGTGCTGCTGGTGGAGGCCGGCGGCGAGCGTCTGCTGCTGACCGGTGATATCGATGCCGCGGCCGAGCGGGCACTG
CTCGACAGCCATCCGGAGTGGCGCGCCGACTGGCTGCTGGCGCCGCACCATGGCAGTCGCAGCTCGTCCTCGCGGGCGCT
GCTCGAGGCCCTGGCGCCGCGCGCGGTGCTGATCTCCCGCAGTTGGAACAACGCTTTCGGCCACCCGCATCCGGAGGCCG
TCGCACGCTATCGAAACCTGCCGGCGGCGCTCTACGATACCGCCCGTCAGGGCGCCCTGCAGTTCCGCCTGGGGGACTGG
GGCAGGGCGCAGGGGCTGCGCGAAGAGCCCCGCTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (196-461)

• Domain of unknown function (DUF4131) (DUF4131) (17-163)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-677)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.332	95.245	0.641
comA	Ralstonia pseudosolanacearum GMI1000	34.704	100	0.39