Detailed information NTG0136613

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: RR32_RS04725
• Genome accession: NZ_CP010368
• Coordinates: 1001363..1003795 (+)
• Length: 810 a.a.
• NCBI ID: WP_039246796.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain 6411
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	999365..1008470	1001363..1003795	within	0

Gene organization within MGE regions

Location: 999365..1008470

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RR32_RS04715 (RR32_04720)	-	999365..1000600 (+)	1236	WP_004707458.1	lipoprotein-releasing ABC transporter permease subunit	-
RR32_RS04720 (RR32_04725)	lolD	1000593..1001279 (+)	687	WP_004707461.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
RR32_RS04725 (RR32_04730)	comA/comEC	1001363..1003795 (+)	2433	WP_039246796.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RR32_RS04730 (RR32_04735)	-	1003748..1004731 (-)	984	WP_080746702.1	lysophospholipid acyltransferase family protein	-
RR32_RS04735 (RR32_04740)	sppA	1004864..1005880 (+)	1017	WP_031981962.1	signal peptide peptidase SppA	-
RR32_RS04740 (RR32_04745)	-	1005900..1006709 (+)	810	WP_031981963.1	alpha/beta fold hydrolase	-
RR32_RS04745 (RR32_04750)	purN	1006774..1007403 (-)	630	WP_080746703.1	phosphoribosylglycinamide formyltransferase	-
RR32_RS04750 (RR32_04755)	purM	1007400..1008470 (-)	1071	WP_000071984.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92599.96 Da
• Isoelectric Point: 9.0084

>NTDB_id=136613 RR32_RS04725 WP_039246796.1 1001363..1003795(+) (comA/comEC) [Acinetobacter nosocomialis strain 6411]
MLKIILLGWVVGIALMGINLPLIMQYGKVGKALLLLAFIFYLFKRSVFVSRPFLKAMYSLLCAASLFVVGYQYAENALVE
RLQQREMDSKNLDIIVYINQLSEEKDNKVQQNAQVLNLSKDPVNWLLYLKNDNQSVLNSNQELQLGHYYRLSGKTKPAHS
YATAGAFDQEKWFIQRNIMSGFIVQHIEPLSRDEIYRLGYQQHSREQQSFFNRFQINIEKLRLNFRHLLQNSSLHQKGLI
LALLTGDESLLSDETQIQFKQLGIAHLLAISGPHVLIFAIMLSWFCHQVICRYYPQIYLWKPKQVLMAIPCCFGVLIYTA
FVGFEIPALRTLLSVFIFISFIVLKQPLKPFALLVYSASLLLLMDPFSVLSAGFWLSYGACFILLRIYQTIVQIPDQHFL
SLRSKMIFMTKVLIESQGKIFIALSPLTLLFFQQISWIAPLTNIVAVPIVGGIIVPLNILAACTWFIVKPFGNMLFYFND
ILLNILLSCLGLLEKLSLPLQGISLTPLALFAVSLGILILFLPKGILPKTWGMLCCLPLIVVNKTNQPIQLHILDVGQGQ
AIFLQQPEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVKRLDRVVLSHLDQDHSGAFPVIQQEFPIKQVLSNEQSSTT
LKQPFQYCHQGQQWQYPELDIQILWPKEKDLAFVHSEQNQYSCVVYLHFKGISDYQNFLIMGDAGWEAEYELLKDYPSLK
VDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQEVINRLKALHTPLKSTVEQGTLSFVLENQKMILHNRR
FERLWLRRVP

Nucleotide

• Length: 2433 bp

>NTDB_id=136613 RR32_RS04725 WP_039246796.1 1001363..1003795(+) (comA/comEC) [Acinetobacter nosocomialis strain 6411]
ATGCTTAAAATTATTTTATTGGGGTGGGTTGTTGGTATTGCATTGATGGGCATTAATTTACCTTTAATTATGCAATATGG
AAAAGTAGGCAAAGCTCTGCTGTTACTTGCTTTTATTTTCTATCTTTTTAAACGCTCAGTATTCGTTAGCCGACCATTTT
TAAAGGCAATGTATTCTTTGTTATGTGCAGCCAGCCTTTTTGTTGTGGGGTATCAATATGCCGAGAATGCGTTGGTCGAA
CGCTTACAACAAAGAGAAATGGATTCAAAAAATCTCGATATTATTGTTTATATAAATCAACTAAGTGAAGAAAAAGACAA
TAAAGTTCAACAAAATGCTCAAGTATTAAACCTATCTAAAGATCCGGTAAATTGGCTACTGTATTTAAAAAATGATAATC
AAAGTGTGTTGAATAGCAATCAAGAACTTCAATTAGGCCATTACTATCGACTATCTGGAAAAACAAAACCTGCTCATAGT
TACGCCACAGCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATAATGTCTGGTTTTATTGTTCAGCATAT
TGAGCCTTTAAGCCGTGATGAAATTTATCGATTGGGATATCAACAGCATTCAAGAGAACAGCAGTCCTTTTTTAATAGAT
TTCAAATAAATATAGAAAAGCTGCGCTTAAATTTTAGGCATCTATTGCAAAATTCTTCACTACATCAAAAAGGACTAATT
TTAGCTTTGCTGACTGGTGATGAAAGCCTTTTATCAGATGAGACCCAAATACAATTTAAACAATTGGGAATTGCTCACTT
GTTAGCGATTTCAGGGCCACATGTACTTATTTTTGCCATCATGTTGTCTTGGTTCTGTCATCAAGTCATCTGCCGTTATT
ATCCTCAAATTTACTTATGGAAACCCAAACAAGTTTTGATGGCTATACCATGCTGTTTCGGTGTTTTAATTTATACAGCT
TTTGTGGGTTTCGAAATTCCTGCATTACGGACATTGTTGTCAGTCTTTATATTTATTTCTTTTATAGTATTAAAACAACC
TCTTAAACCATTTGCGTTGCTCGTATACAGCGCAAGTTTATTATTACTCATGGACCCGTTTAGTGTCTTGTCTGCAGGTT
TTTGGTTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTATCAAACTATAGTTCAAATACCTGATCAACATTTTTTA
AGCTTACGCTCGAAAATGATTTTTATGACTAAGGTGTTAATTGAGTCTCAAGGCAAAATCTTTATTGCATTGAGTCCTTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGATTGCTCCATTAACCAATATTGTTGCGGTGCCTATCGTTGGTGGGATTA
TTGTTCCTTTAAATATCCTGGCTGCTTGTACATGGTTTATTGTTAAACCATTTGGAAACATGCTTTTTTATTTCAATGAT
ATCTTGCTCAATATATTGCTGAGTTGTTTAGGCTTATTAGAAAAACTGTCTTTACCACTACAAGGTATAAGCTTGACGCC
ACTGGCTTTATTCGCAGTGAGTTTAGGCATCCTTATTTTATTTTTGCCTAAAGGCATTTTGCCAAAAACATGGGGAATGC
TCTGTTGTTTACCTCTCATTGTTGTGAATAAAACGAACCAACCAATTCAACTTCATATTTTAGATGTTGGGCAGGGGCAA
GCTATTTTCTTACAGCAGCCTGAACAAAACTGGTTAATTGATACAGGTGGTTCTTATGATGAAAAGATCTTTAGTATTGG
TCAAAATGTTGTAGTTCCATTCTTACGCCAACAAGGAGTGAAGCGATTAGATCGTGTTGTGCTCTCCCATCTTGATCAAG
ATCATAGTGGGGCTTTTCCTGTCATTCAGCAGGAGTTTCCTATAAAGCAGGTTCTCTCAAATGAGCAATCTTCCACTACT
CTAAAGCAGCCATTTCAGTATTGTCATCAAGGTCAACAATGGCAATATCCTGAATTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATTTAGCTTTTGTCCATTCTGAACAGAATCAATATTCCTGTGTGGTATATCTGCATTTTAAAGGAATTAGTG
ATTACCAAAATTTTCTGATTATGGGAGACGCGGGATGGGAGGCAGAATACGAATTGTTAAAAGACTATCCAAGTTTAAAA
GTAGATGTTTTGGTATTAGGTCATCATGGAAGCAAGCACAGTTCGGCTTATGATTTTTTAGCAACCCTAAAACCAAAACT
GGCAATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAAGAGGTTATCAATCGTTTAAAAGCCCTTCATA
CCCCACTTAAAAGTACAGTAGAGCAAGGAACGTTAAGTTTTGTTCTGGAAAACCAAAAAATGATTTTACACAACCGACGT
TTTGAGCGCCTCTGGTTGCGTAGAGTTCCCTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-633)

• Competence protein (Competence) (243-521)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	83.54	99.753	0.833
comA/comEC	Acinetobacter baumannii strain A118	82.797	99.753	0.826
comA/comEC	Acinetobacter baylyi ADP1	50.616	100	0.507