Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   EHS42_RS16320 Genome accession   NZ_CP010350
Coordinates   3335407..3336540 (+) Length   377 a.a.
NCBI ID   WP_010325661.1    Uniprot ID   A0AAJ6IF41
Organism   Acinetobacter johnsonii XBB1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3330407..3341540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHS42_RS16300 (RZ95_16155) - 3330949..3332976 (-) 2028 WP_010325664.1 TonB-dependent copper receptor -
  EHS42_RS16305 (RZ95_16160) - 3333048..3333485 (-) 438 WP_010325663.1 DUF2946 family protein -
  EHS42_RS16310 (RZ95_16165) def 3333576..3334109 (-) 534 WP_004684452.1 peptide deformylase -
  EHS42_RS16315 (RZ95_16170) tsaP 3334230..3335384 (+) 1155 WP_010325662.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  EHS42_RS16320 (RZ95_16175) dprA 3335407..3336540 (+) 1134 WP_010325661.1 DNA-processing protein DprA Machinery gene
  EHS42_RS16325 (RZ95_16180) - 3336586..3337155 (+) 570 WP_010325660.1 L-threonylcarbamoyladenylate synthase -
  EHS42_RS16330 (RZ95_16185) - 3337555..3338475 (-) 921 WP_010325659.1 DMT family transporter -
  EHS42_RS16335 (RZ95_16190) - 3338811..3339365 (+) 555 WP_010325658.1 hypothetical protein -
  EHS42_RS16340 (RZ95_16195) - 3339489..3340034 (+) 546 WP_004984048.1 glutathione peroxidase -
  EHS42_RS16345 (RZ95_16200) - 3340232..3340606 (+) 375 WP_029574920.1 RcnB family protein -
  EHS42_RS16350 (RZ95_16205) - 3340741..3341331 (+) 591 WP_010325656.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41695.35 Da        Isoelectric Point: 6.7431

>NTDB_id=136577 EHS42_RS16320 WP_010325661.1 3335407..3336540(+) (dprA) [Acinetobacter johnsonii XBB1]
MLNSLSHEQIATITLWYLVQHSLSSFQKLQQHFGTSTKAVAASNHQIWPNLGLHKSHLQRVVEIQTPAGQIKLQTLLQDV
QASCDFILLDTESHYPSQLLPYADRPPILFGQGNPQSLLQPQVAIVGSRKPSPHGKQVAYDFAYYLAEKGFYICSGLAEG
IDAAAHQGGLKHQRTIAVMGTGLDLTYPSQHQTLRTQILENNGCIITEFLPQTPPLKRNFPRRNRIVSALSLGVVVAEAA
LKSGSLGTAKSAAEQGKTIFAIPGHIYSEHHQGCHQLIREGAILVDHPEQIIEDLALPTQWHSQSQSQETTPSASIEIPS
DLLELYNQLDWVGQNMDQLNFKLNIDIATLTSQLMELEILGLAQQQAGNYLRCRSNQ

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=136577 EHS42_RS16320 WP_010325661.1 3335407..3336540(+) (dprA) [Acinetobacter johnsonii XBB1]
ATGCTGAACTCTTTATCACATGAACAGATTGCAACAATCACCCTGTGGTATTTGGTTCAGCATTCTTTATCGAGCTTTCA
AAAACTACAGCAGCATTTTGGCACAAGCACAAAAGCTGTTGCTGCCTCCAATCATCAGATCTGGCCAAATCTCGGCTTAC
ACAAAAGTCATCTACAACGTGTCGTAGAAATTCAAACACCTGCTGGACAAATCAAATTACAAACTTTACTGCAGGACGTC
CAAGCCAGTTGTGATTTTATTTTGCTTGATACTGAAAGTCATTATCCCTCGCAGCTGCTGCCCTATGCTGACCGACCACC
GATTTTATTTGGTCAGGGCAATCCACAAAGTCTACTCCAGCCTCAAGTTGCTATCGTCGGCAGTCGAAAACCCAGTCCGC
ACGGCAAGCAAGTGGCTTATGACTTTGCTTATTATCTCGCCGAGAAAGGCTTTTATATTTGCAGTGGTTTAGCTGAAGGC
ATTGATGCTGCAGCACATCAGGGCGGATTAAAACATCAACGTACCATTGCGGTGATGGGCACGGGCTTAGATCTCACCTA
TCCTTCCCAACATCAAACACTGCGTACGCAAATATTAGAAAATAATGGCTGTATTATTACTGAGTTTTTACCTCAAACCC
CGCCTTTAAAACGTAATTTCCCACGGCGAAACCGCATCGTCAGTGCATTGAGTTTAGGAGTTGTGGTTGCAGAAGCCGCA
CTCAAAAGTGGCTCTCTTGGCACAGCCAAATCTGCTGCTGAACAAGGCAAGACGATTTTTGCGATTCCCGGTCATATTTA
CAGCGAACACCATCAAGGTTGTCATCAACTGATCCGAGAAGGGGCGATTTTGGTCGATCATCCTGAGCAAATCATTGAAG
ACTTGGCACTCCCCACTCAATGGCATAGCCAATCCCAGTCACAAGAAACCACCCCAAGTGCTAGTATTGAGATCCCATCT
GATTTACTCGAACTTTATAATCAACTGGATTGGGTTGGACAAAATATGGATCAACTTAATTTCAAACTTAACATCGATAT
TGCCACACTCACTAGCCAGTTAATGGAACTGGAGATTTTAGGACTCGCACAACAACAGGCTGGCAATTATCTGCGTTGCC
GTTCCAACCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

66.755

99.735

0.666

  dprA Acinetobacter baumannii D1279779

65.691

99.735

0.655

  dprA Acinetobacter baylyi ADP1

60.63

100

0.613


Multiple sequence alignment