Detailed information NTG0136305

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: RP72_RS19090
• Genome accession: NZ_CP010314
• Coordinates: 3620620..3621342 (-)
• Length: 240 a.a.
• NCBI ID: WP_003227991.1
• Uniprot ID: A0AAE2SKX0
• Organism: Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3615620..3626342

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RP72_RS19055 (RP72_19055)	fliW	3615759..3616190 (-)	432	WP_003228007.1	flagellar assembly protein FliW	-
RP72_RS19060 (RP72_19060)	yviE	3616211..3616786 (-)	576	WP_003243053.1	DUF6470 family protein	-
RP72_RS19065 (RP72_19065)	flgL	3616833..3617729 (-)	897	WP_003228004.1	flagellar hook-associated protein FlgL	-
RP72_RS19070 (RP72_19070)	flgK	3617740..3619263 (-)	1524	WP_003228001.1	flagellar hook-associated protein FlgK	-
RP72_RS19075 (RP72_19075)	flgN	3619282..3619764 (-)	483	WP_003227999.1	flagellar protein FlgN	-
RP72_RS19080 (RP72_19080)	flgM	3619780..3620046 (-)	267	WP_003227997.1	flagellar biosynthesis anti-sigma factor FlgM	-
RP72_RS19085 (RP72_19085)	yvyF	3620127..3620546 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
RP72_RS19090 (RP72_19090)	comFC	3620620..3621342 (-)	723	WP_003227991.1	comF operon protein ComFC	Machinery gene
RP72_RS19095 (RP72_19095)	comFB	3621306..3621602 (-)	297	WP_003227989.1	late competence protein ComFB	-
RP72_RS19100 (RP72_19100)	comFA	3621662..3623053 (-)	1392	WP_003243962.1	ATP-dependent helicase ComFA	Machinery gene
RP72_RS19105 (RP72_19105)	fakBA	3623159..3624004 (-)	846	WP_003244125.1	DegV family protein	-
RP72_RS19110 (RP72_19110)	degU	3624102..3624791 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RP72_RS19115 (RP72_19115)	degS	3624874..3626031 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27477.75 Da
• Isoelectric Point: 9.0021

>NTDB_id=136305 RP72_RS19090 WP_003227991.1 3620620..3621342(-) (comFC) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAHLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSECIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Nucleotide

• Length: 723 bp

>NTDB_id=136305 RP72_RS19090 WP_003227991.1 3620620..3621342(-) (comFC) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTACTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACATCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGTGCATTTTTGATACAAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	100	100	1