Detailed information NTG0134071

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QR42_RS16080
• Genome accession: NZ_CP010075
• Coordinates: 3167371..3168546 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. WP8
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3162371..3173546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QR42_RS16050 (QR42_16050)	-	3162538..3162957 (-)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
QR42_RS16055 (QR42_16055)	-	3163014..3163700 (-)	687	WP_064497978.1	ComF family protein	-
QR42_RS16060 (QR42_16060)	-	3163697..3163990 (-)	294	WP_039181811.1	competence protein ComFB	-
QR42_RS16065 (QR42_16065)	comFA	3164040..3165437 (-)	1398	WP_144246074.1	DEAD/DEAH box helicase	Machinery gene
QR42_RS16070 (QR42_16070)	-	3165558..3166400 (-)	843	WP_039181815.1	DegV family protein	-
QR42_RS16075 (QR42_16075)	degU	3166617..3167306 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QR42_RS16080 (QR42_16080)	degS	3167371..3168546 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
QR42_RS16085 (QR42_16085)	-	3168768..3169436 (+)	669	WP_012011434.1	YigZ family protein	-
QR42_RS16090 (QR42_16090)	-	3169421..3170512 (+)	1092	WP_039181819.1	LCP family protein	-
QR42_RS16095 (QR42_16095)	-	3170548..3171615 (-)	1068	WP_034660156.1	MraY family glycosyltransferase	-
QR42_RS16100 (QR42_16100)	-	3171750..3172946 (-)	1197	WP_235354826.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=134071 QR42_RS16080 WP_003213166.1 3167371..3168546(-) (degS) [Bacillus sp. WP8]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=134071 QR42_RS16080 WP_003213166.1 3167371..3168546(-) (degS) [Bacillus sp. WP8]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAGGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTACTAAGCTTGCAAGACGTCATAGAAC
GCTCTGAAACCCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTATTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTAAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCAACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACCAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCGCTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841