Detailed information    

insolico Bioinformatically predicted

Overview

Name   sinI   Type   Regulator
Locus tag   QF06_RS10490 Genome accession   NZ_CP010014
Coordinates   2159080..2159253 (+) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus sp. YP1     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context

Location: 2154080..2164253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QF06_RS10475 (QF06_10475) gcvT 2154880..2155968 (-) 1089 WP_041850013.1 glycine cleavage system aminomethyltransferase GcvT -
  QF06_RS10480 (QF06_10480) - 2156409..2158082 (+) 1674 WP_041850014.1 SNF2-related protein -
  QF06_RS10485 (QF06_10485) - 2158103..2158897 (+) 795 WP_003230200.1 YqhG family protein -
  QF06_RS10490 (QF06_10490) sinI 2159080..2159253 (+) 174 WP_003230187.1 anti-repressor SinI family protein Regulator
  QF06_RS10495 (QF06_10495) sinR 2159287..2159622 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  QF06_RS10500 (QF06_10500) tasA 2159715..2160500 (-) 786 WP_015251717.1 biofilm matrix protein TasA -
  QF06_RS10505 (QF06_10505) - 2160564..2161136 (-) 573 WP_003246088.1 signal peptidase I -
  QF06_RS10510 (QF06_10510) tapA 2161120..2161881 (-) 762 WP_015251716.1 amyloid fiber anchoring/assembly protein TapA -
  QF06_RS10515 (QF06_10515) - 2162153..2162479 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  QF06_RS10520 (QF06_10520) - 2162521..2162700 (-) 180 WP_003230176.1 YqzE family protein -
  QF06_RS10525 (QF06_10525) comGG 2162771..2163145 (-) 375 WP_015251714.1 ComG operon protein ComGG Machinery gene
  QF06_RS10530 (QF06_10530) comGF 2163146..2163529 (-) 384 WP_041850015.1 ComG operon protein ComGF Machinery gene
  QF06_RS10535 (QF06_10535) comGE 2163555..2163902 (-) 348 WP_003230165.1 ComG operon protein 5 Machinery gene

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=133561 QF06_RS10490 WP_003230187.1 2159080..2159253(+) (sinI) [Bacillus sp. YP1]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=133561 QF06_RS10490 WP_003230187.1 2159080..2159253(+) (sinI) [Bacillus sp. YP1]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains

Predicted by InterproScan.

Anti-repressor SinI (SinI)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment