Detailed information NTG0132305

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: OB04_RS01975
• Genome accession: NZ_CP009796
• Coordinates: 387374..388522 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain SG6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 382374..393522

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OB04_RS01955 (OB04_00380)	yclH	382750..383430 (-)	681	WP_038428353.1	ABC transporter ATP-binding protein	-
OB04_RS01960 (OB04_00381)	yclI	383446..384906 (-)	1461	WP_038428354.1	ABC transporter permease	-
OB04_RS01965 (OB04_00382)	yclJ	385119..385802 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
OB04_RS01970 (OB04_00383)	yclK	385789..387210 (+)	1422	WP_082098066.1	two-component system sensor histidine kinase YclK	-
OB04_RS01975 (OB04_00384)	rapC	387374..388522 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
OB04_RS01980 (OB04_00385)	phrC	388506..388628 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
OB04_RS21215 (OB04_00386)	yczM	388728..388817 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
OB04_RS21220 (OB04_00387)	yczN	388899..389012 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
OB04_RS01995 (OB04_00388)	thrD	389166..390530 (-)	1365	WP_038428355.1	aspartate kinase	-
OB04_RS02000 (OB04_00389)	ceuB	390915..391865 (+)	951	WP_038428356.1	petrobactin ABC transporter permease YclN	Machinery gene
OB04_RS02005 (OB04_00390)	yclO	391858..392805 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=132305 OB04_RS01975 WP_003246686.1 387374..388522(+) (rapC) [Bacillus subtilis strain SG6]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=132305 OB04_RS01975 WP_003246686.1 387374..388522(+) (rapC) [Bacillus subtilis strain SG6]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTAGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCCTTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTAAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571