Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AK40_RS18055 | Genome accession | NZ_CP009641 |
| Coordinates | 2746178..2747221 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013200.1 | Uniprot ID | A0AA96SWA8 |
| Organism | Bacillus cereus 03BB108 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2741178..2752221
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AK40_RS18010 (AK40_2824) | - | 2741605..2741805 (-) | 201 | WP_000106084.1 | YqzE family protein | - |
| AK40_RS18015 (AK40_2825) | aroK | 2741844..2742341 (-) | 498 | WP_000836631.1 | shikimate kinase AroK | - |
| AK40_RS18020 (AK40_2826) | - | 2742462..2743112 (-) | 651 | WP_000183851.1 | 2OG-Fe(II) oxygenase | - |
| AK40_RS18025 (AK40_2827) | comGG | 2743288..2743659 (-) | 372 | WP_001231191.1 | competence type IV pilus minor pilin ComGG | - |
| AK40_RS18030 (AK40_2828) | comGF | 2743656..2744126 (-) | 471 | WP_000923089.1 | competence type IV pilus minor pilin ComGF | - |
| AK40_RS18035 (AK40_2829) | comGE | 2744096..2744398 (-) | 303 | WP_000829458.1 | competence type IV pilus minor pilin ComGE | - |
| AK40_RS18040 (AK40_2830) | comGD | 2744391..2744846 (-) | 456 | WP_000810393.1 | comG operon protein ComGD | - |
| AK40_RS18045 (AK40_2831) | comGC | 2744843..2745142 (-) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| AK40_RS18050 (AK40_2832) | comGB | 2745154..2746185 (-) | 1032 | WP_001995198.1 | comG operon protein ComGB | - |
| AK40_RS18055 (AK40_2833) | comGA | 2746178..2747221 (-) | 1044 | WP_001013200.1 | competence protein ComGA | Machinery gene |
| AK40_RS18060 (AK40_2834) | - | 2747427..2748122 (+) | 696 | WP_000434117.1 | helix-turn-helix transcriptional regulator | - |
| AK40_RS18065 (AK40_2835) | - | 2748248..2748490 (+) | 243 | WP_000440711.1 | DUF2626 domain-containing protein | - |
| AK40_RS18070 (AK40_2836) | - | 2748598..2749992 (+) | 1395 | WP_001094329.1 | L-cystine transporter | - |
| AK40_RS18075 (AK40_2837) | - | 2750209..2750424 (-) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| AK40_RS18080 (AK40_2838) | - | 2750678..2750989 (+) | 312 | WP_001093243.1 | hypothetical protein | - |
| AK40_RS18085 (AK40_2839) | - | 2751026..2751514 (-) | 489 | WP_000764279.1 | hypothetical protein | - |
| AK40_RS18090 (AK40_2840) | - | 2751594..2751968 (-) | 375 | WP_001012350.1 | nucleoside 2-deoxyribosyltransferase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39412.97 Da Isoelectric Point: 9.2147
>NTDB_id=130892 AK40_RS18055 WP_001013200.1 2746178..2747221(-) (comGA) [Bacillus cereus 03BB108]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=130892 AK40_RS18055 WP_001013200.1 2746178..2747221(-) (comGA) [Bacillus cereus 03BB108]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |