Detailed information NTG0130869

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: WX60_RS06845
• Genome accession: NZ_CP012027
• Coordinates: 1261836..1262420 (+)
• Length: 194 a.a.
• NCBI ID: WP_003694238.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FA6140
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1256836..1267420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WX60_RS14940	-	1257575..1257685 (+)	111	Protein_1269	IS5/IS1182 family transposase	-
WX60_RS06815 (WX60_01299)	-	1257766..1258554 (-)	789	WP_004467096.1	class I SAM-dependent methyltransferase	-
WX60_RS06820 (WX60_01300)	bioH	1258551..1259300 (-)	750	WP_010360850.1	pimeloyl-ACP methyl ester esterase BioH	-
WX60_RS06825 (WX60_01301)	-	1259299..1260024 (+)	726	WP_003696136.1	ComF family protein	-
WX60_RS06830 (WX60_01302)	trmL	1260089..1260553 (+)	465	WP_003689916.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
WX60_RS06835 (WX60_01303)	-	1260681..1261367 (+)	687	WP_003689919.1	septal ring lytic transglycosylase RlpA family protein	-
WX60_RS06840 (WX60_01304)	-	1261428..1261754 (+)	327	WP_003689921.1	PepSY domain-containing protein	-
WX60_RS06845 (WX60_01305)	ruvA	1261836..1262420 (+)	585	WP_003694238.1	Holliday junction branch migration protein RuvA	Machinery gene
WX60_RS14945 (WX60_01306)	-	1262420..1262557 (+)	138	WP_003689926.1	hypothetical protein	-
WX60_RS06855 (WX60_01307)	-	1262583..1264439 (+)	1857	WP_003689927.1	ABC transporter ATP-binding protein	-
WX60_RS06860 (WX60_01308)	rsgA	1264444..1265367 (+)	924	WP_003689928.1	ribosome small subunit-dependent GTPase A	-
WX60_RS06865 (WX60_01309)	-	1265480..1265704 (+)	225	WP_003689929.1	exodeoxyribonuclease VII small subunit	-
WX60_RS06870 (WX60_01310)	-	1265688..1266584 (+)	897	WP_003691917.1	polyprenyl synthetase family protein	-
WX60_RS06875 (WX60_01311)	-	1266701..1267000 (-)	300	WP_010359269.1	DUF2818 family protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20829.12 Da
• Isoelectric Point: 7.2073

>NTDB_id=130869 WX60_RS06845 WP_003694238.1 1261836..1262420(+) (ruvA) [Neisseria gonorrhoeae strain FA6140]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDRLFAASPAADETEDIVSTLLA
LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=130869 WX60_RS06845 WP_003694238.1 1261836..1262420(+) (ruvA) [Neisseria gonorrhoeae strain FA6140]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGTTATGA
AGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCGGGCGGTTGCAGAAGAAGATGT
CAAACGCCTCTCCTCCGCTCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACAGGCTGTTTGCCGCCTCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAACGAACGCGAGGCAAAAGCGGCGGTCAAAGGCGTTCCGAAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCCCTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

• RuvA, C-terminal domain (RuvA_C) (150-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	34.951	100	0.371